Arachis ipaensis: 107608916
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Entry
107608916 CDS
T04301
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
aip
Arachis ipaensis
Pathway
aip04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107608916
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GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
107608916
NCBI-ProteinID:
XP_016166188
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Position
B07:complement(50533583..50538976)
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AA seq
682 aa
AA seq
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MSGGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFIYAPEEEGQYYPGRVSRWWLKNS
LAHLDSSLRSLGTPLITKRSTDSVSSLLDVVKSTGATQLFFNHLYDPLSLIRDHRAKEVL
TAQGITVRSFNSDLLYEPWDVNDANGQPFTTFSAFWERCLSMPYDPQAPLLPPKRIIPGD
VSRCQGDTLVFEDESEKASNALLARAWSPGWSNADKALTAFINGPLIEYAKNRRKADSAT
TSFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGNQAGEESVNLFLKSIGLREYSRYISFN
HPYSHERPLLGHLKFFPWVINESHFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS
SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKF
DPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKARLQE
ALIQMWQLEAASRAAIENGVEEGLGDSTELAPIAFPEDIQMEESHEPVRNNPPVGPRRYE
DQMVPSMTSSLVRVEEEEASSDLRNLAEESRAEVPTNATAQQNARETVNQGVLQNVNRNT
QVQHNNTTAWLRNAAEDSTAESSSSTRRERDGGVVPVWSPPSSSYAEPFVDDESGIGASS
SYLQNHPQSHRLMNWTRLPQTG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggggtggtggttgcagcatagtatggttcaggagagatctgagggtagaggat
aacccagcactagctgcaggtgttagagctggagcagtagttgctgtgttcatatatgca
cctgaggaagaaggacaatactaccccggaagggtatcaaggtggtggttaaagaacagc
ttggctcaccttgattcttctcttagaagccttggtacccctctcatcactaaaagatcc
actgatagtgtttcttctcttttggatgttgttaagtccactggagctactcaactcttc
tttaaccatttatatgatccattgtcacttatcagggatcacagagcaaaggaggttctg
actgcacaaggcataaccgttcgttccttcaattccgatttgttatatgagccgtgggat
gtcaatgatgccaatggccaaccattcacaactttttctgctttttgggaaagatgcctt
agcatgccttatgacccacaagcacctcttctcccacctaaaaggattattccaggagat
gtatcaaggtgtcagggtgatacactggtgtttgaagatgaatccgagaaagcaagcaat
gcacttcttgcacgagcatggtcaccagggtggagcaatgctgataaggccttaacagca
tttataaacggtcccctgattgagtatgcaaagaatcgcaggaaggccgatagtgccaca
acctcattcctctccccacatttgcattttggcgaggtgagtgtcaagaaagttttccat
ctcgtccgaatcaagcaagtcctttgggccaatgaaggaaaccaggctggtgaagaaagt
gtgaatttgtttcttaagtctattggtcttagagaatattcaaggtacatcagtttcaac
cacccttatagtcatgaaaggcctcttctaggccaccttaagttctttccttgggttata
aacgagagccatttcaaggcatggcgacaaggcaggacaggctatcctttggtggatgct
ggcatgcgagagctatgggccactggctggctgcatgatcgaattcgtgtcgtggtttcc
agtttctttgtgaaggttctgcagcttccttggagatggggaatgaaatatttttgggat
acgctcttggatgcagatcttgagagcgatgctcttggttggcagtacatatctggtact
cttcctgatggccgtgaattcgaccgaatagataatccacagtttgagggatacaagttt
gatccaaatggagaatatgttcggcgctggcttcctgaactttctagattgccaactgaa
tggatacatcatccatggaatgcacctgaatctgtactccaagctgctggaatcgaactt
ggttctaactaccctcttccaattgtaggaatagatgcagcaaaagcaagacttcaagaa
gcacttatacaaatgtggcaactagaagcagcttcaagagcagcaatcgaaaatggagtt
gaggaagggcttggagactccaccgaattggcccccattgctttccctgaagacatacag
atggaggaaagccatgaacctgttaggaacaatcccccggttggtcctaggcgttacgag
gatcagatggtccccagtatgacttcttccctggtgagggtggaagaggaagaggcttcc
tcagatcttcgaaacttggcagaagaaagcagagctgaagtgccaactaatgcaactgca
caacaaaatgcaagagagacggtgaaccaaggagtgttgcagaatgttaatagaaacaca
caagtacagcataataatactacagcgtggctgagaaatgcggctgaagattcgacagca
gaatcttcaagtagtactaggagagaaagggatggaggagtagttccagtatggtctccc
ccgtcttctagttatgcagagccatttgtagatgatgagagtggaataggagccagttca
tcatacttgcagaatcatcctcagtcgcacagattaatgaattggacacgtctacctcaa
actgggtaa
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