Arachis ipaensis: 107609146
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Entry
107609146 CDS
T04301
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
aip
Arachis ipaensis
Pathway
aip00100
Steroid biosynthesis
aip00909
Sesquiterpenoid and triterpenoid biosynthesis
aip01100
Metabolic pathways
aip01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107609146
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
107609146
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
aip01006
]
107609146
Enzymes [BR:
aip01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
107609146
Prenyltransferases [BR:
aip01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107609146
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF2172
Motif
Other DBs
NCBI-GeneID:
107609146
NCBI-ProteinID:
XP_016166479
LinkDB
All DBs
Position
B07:67247515..67251876
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AA seq
416 aa
AA seq
DB search
MGSLGAVMKHPDDLFPLVKLKMAMRHAEKQIPPQPHWCFCYTMLQKVSRSFALVIQQLDT
DLRNAVCIFYLVLRALDTVEDDTSVATDVKVPILIAFHRHVYDRDWHFSCGTKEYKILMD
QFHHVSTAFLELGRNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHASGSEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL
EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDLSIFRFCAIPQVMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGSFFDFSCMIKSKVDQNDPNAAKTLSRL
EAIQKTCRESGLLSKRKLYVLPNKASYSSTIILILLIFLPIIFAYLSANRRNNELS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgggagcggttatgaaacaccctgacgacctttttccgctggtgaagctg
aagatggcaatgaggcacgccgagaagcagatccctccacagcctcactggtgtttctgc
tacactatgctccagaaggtttctagaagcttcgctctcgtcattcagcagcttgacact
gacctccgtaacgccgtttgcatattctatttggttcttcgagccctagataccgtcgag
gatgatacaagcgtagctacggatgtgaaggttccaattctgatagcatttcatcgtcac
gtatatgatcgtgattggcacttttcatgtggcacaaaggagtacaaaatcctcatggac
cagtttcatcacgtttctactgcatttttagaacttggaaggaactatcaggaagcaatt
gaagatattaccaaaagaatgggtgcaggaatggccaaatttatttgcaaggaggtagaa
acaattgatgactatgatgaatattgtcattatgtggcaggacttgttgggttaggttta
tctaagcttttccatgcctctggttcagaagatttggctccagaccacctttccaattca
atgggtctgtttcttcagaaaacaaacatcattagagattatcttgaagacatcaatgag
atcccaaagtcacgcatgttttggcctcggcagatctggagtaaatacgtagacaaactt
gaggatttgaagtatgaggagaactcagttaaagcagtgcaatgcttgaatgacatggtc
actaatgctttgctgcatgctgaagattgcttaaaatacatgtctgctttaagagactta
tctatatttcgtttttgtgctattccccaggtcatggcaattggaacactggcattatgc
tacaacaatattgaagtcttcagaggagtagttaaaatgaggcgtggtctaactgcaaag
gtgattgaccgaacaaagacaatggctgatgtctatggttctttctttgacttttcctgt
atgataaagtccaaggttgaccaaaatgatcccaatgcggcaaaaacattgagcaggctg
gaagctatacagaaaacttgcagggaatctggtctccttagtaaaaggaaattatacgta
ctgccaaataaagccagctacagctcgaccattattctcatacttctgatcttcttgccc
atcatttttgcgtatctctcagcaaaccgccggaataacgagctatcctag
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