Arachis ipaensis: 107609579
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Entry
107609579 CDS
T04301
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aip
Arachis ipaensis
Pathway
aip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107609579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107609579
03036 Chromosome and associated proteins [BR:
aip03036
]
107609579
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107609579
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107609579
PBAF complex
107609579
GBAF(ncBAF) complex
107609579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
107609579
NCBI-ProteinID:
XP_016167068
LinkDB
All DBs
Position
B07:95305710..95308182
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AA seq
490 aa
AA seq
DB search
MATNSPATAPPPPKPGDPPSSSTETTPPPPKQPPQPSPSPAKPEAPLSDSKPSTEATLVL
VPSHSRWFSLHSIHQCEVRHLPEFFDSPSSSSKNPRVYKYYRNSIVKYFRYNPSRKITFT
DVRKTLVGDVGSIRRVFDFLEAWGLINYLPSSSMNKPLKWDDKESKSESGSNTAEPPPPV
RENTKRICSGCKAVCTIACFACDKYDLTLCARCYVRGNYRVGVSSSDFRRVEISEETKTD
WSEKETLNLLEAVTHYGDDWKRVSQHVGGRTEKDCVAHFIKLPFGDQFLRYRDGGATDDT
ANQLRQNAAVAECDSEAGGAAEHSKRMRLTPLADASNPIMAQAAFLSALAGSEVAYSAAQ
AAVATLSEAYKTTKNHRSFPRNTSLQEAGIASNGGTSSDSSQASRFHANILLEKEELDVE
KAISEIIEVQMKNIQDKLLRFENSDLMIEKECQQLEQMKNLLFLDQLSLLFQKQSAPKSG
EHKGNGVKTN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaactctcccgccacagctccgcctccacccaaaccgggtgaccctccttct
tcttccaccgaaaccacaccgccccctcccaagcaaccaccacagccctcaccttctccg
gcgaagcccgaagccccattgtctgactcaaaaccctccacagaagccaccctcgtgctg
gtccccagtcactcgagatggttctccttacattccattcaccaatgcgaggtccgccac
ctccccgagttctttgactccccctcttcctcctccaagaaccctagggtttacaagtac
tacaggaactccatagtcaagtacttccgttacaacccttcccgaaaaatcaccttcacc
gacgtcaggaaaaccctcgtcggtgacgtcggttccatccgcagagtcttcgatttcctc
gaagcatggggattgatcaattaccttccgtcttcgtccatgaacaagcccttgaagtgg
gacgacaaagagtccaaatccgaatctggatccaacactgccgaacccccaccacctgtt
cgagaaaacaccaagagaatctgcagcggatgcaaagccgtttgcaccattgcttgcttt
gcttgtgataagtatgatttgactctgtgtgcgagatgctatgttcgtgggaattataga
gtgggtgtgagttcttcggattttaggcgagttgagataagtgaagagactaagacggat
tggagtgagaaggagactctgaatcttctggaagccgttacgcattatggtgatgactgg
aagagagtttcccagcatgttggtggcaggacagagaaggactgcgttgctcatttcatc
aagcttccttttggggaccagttcctgcgttatcgagatggcggtgcgactgacgacact
gcaaatcagctgaggcagaatgctgctgtagccgaatgcgattcagaagctggtggtgca
gccgagcatagtaaaagaatgcgactcacccctcttgccgatgcaagcaaccctattatg
gctcaggctgcttttctgtcagctctggctggatcagaggttgcatattctgctgcacaa
gctgcagtggcaactctctcggaggcttacaaaacaactaaaaatcatcgatcattccca
agaaacacatcactacaagaagctggtattgcatctaatggtggtacctcttcagattca
tcacaagcatctcgatttcatgcaaatatactgctcgaaaaagaagagttagatgtggaa
aaggcaatttctgagattattgaagttcagatgaaaaatatccaagacaagcttcttcgt
tttgagaattcagacttgatgatagagaaagaatgccagcagttggagcaaatgaagaac
ttgcttttccttgatcagctttctcttttatttcaaaagcaatctgcaccaaaatctgga
gaacacaaaggcaatggtgtaaagacaaattga
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