Arachis ipaensis: 107609748
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Entry
107609748 CDS
T04301
Name
(RefSeq) cell differentiation protein RCD1 homolog isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107609748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107609748
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107609748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
107609748
NCBI-ProteinID:
XP_016167251
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All DBs
Position
B07:2633632..2636888
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AA seq
297 aa
AA seq
DB search
MKMIEVSQIAAEQLVLELSNPDLRENALLELSKKRELYQDLALLLWNSFGTIAALLQEIV
SIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRP
FEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMELGSELSKTVATFIVQKILL
DDVGLDYVCTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNRRLDNRACD
ALRSCLPEMLRDATFNTCLREDQTTRRWLQQLLHNVGVNRVPPLQAGAGFDHNMMVA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgattgaggtttcccaaatcgctgctgagcaacttgttctcgaactcagcaac
cccgatctccgagaaaatgctcttctcgaactctccaagaagagagagttatatcaagat
ctcgctctgttactgtggaattcctttggcaccattgcagcgcttttacaggaaatagtt
tctatataccctgttctttcgcccccaaatcttactccagctcaatcaaatcgagtgtgc
aatgctcttgctcttcttcagtgtgtggcatctcaccctgatacaaggatgctattcctc
aatgctcatatacctctatatttgtatcctttccttaatacaacaagcaagtcaagacca
tttgaatatttgaggcttactagccttggtgtcattggtgctttagtgaaggttgatgat
acggaagttataagtttccttctttcaacagaaataattccgttgtgccttcgcactatg
gaactgggaagtgaattgtcaaaaacagttgcaacctttatagttcagaaaattcttttg
gatgatgtgggtttggattatgtttgtaccacagcggaacgcttttttgcagtaggtcga
gttctggggaacatggtggcagctctggctgagcaaccctcatctcgccttttgaagcac
attattcgttgctatcttcgtctatccgataatcggaggttggataacagggcttgtgat
gcactaagaagctgtcttccggagatgttaagagatgctacttttaatacctgccttcgt
gaagaccaaacaactaggaggtggctacagcagttgcttcacaatgttggagtgaatagg
gttcctccactacaagccggagcaggattcgatcataatatgatggtggcgtga
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