Arachis ipaensis: 107610064
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Entry
107610064 CDS
T04301
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-I
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
aip
Arachis ipaensis
Pathway
aip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107610064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107610064
03019 Messenger RNA biogenesis [BR:
aip03019
]
107610064
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107610064
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107610064
U7-dependent histone pre-mRNA processing factors
107610064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
107610064
NCBI-ProteinID:
XP_016167621
LinkDB
All DBs
Position
B07:complement(105632328..105635246)
Genome browser
AA seq
701 aa
AA seq
DB search
MASTATTQGPGPGAKRRDGGSSMSERKREEEQLIVTPLGAGNEVGRSCVYMSYKGKTILF
DCGIHPAYYGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLQKTTFRGRVFMTYAT
KAIYKLLLSDYVKVSKVSVEDMLYDEHDINRSMDKIEVIDFHQTIEVNGIRFWCYTAGHV
LGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQHHQPRHTRE
KRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCL
TVYETYTLSMNDRIKNAKSNPFAFKYISALSSIEVFKDIGPSVVMASPSGLQSGLSRQLF
DMWCSDKKNSCIIPGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHADSAQ
TSAFLEELNPPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMA
KTIGKLAEKTPEAGETVSGLLVKKGFAYQIMAPDDLHVFSQLSTASIAQRITIPYSGAFS
IIQHRLKQIYESVESSVDEESGVPTLQVHECVTVKHESEKHVSLHWSSDPISDMVSDSIV
ALILNISRDAPKIIDDSDAIKIVEENEKKAEKVMHALLVSLFGDVKIGENGKLVINIDGN
VAELNKESGEVESENEGLKERVKTAFRRIQSSVKPIPPSAA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacggcgacaacacagggaccggggccaggtgcgaagaggcgggacggcggt
tcatcaatgagcgagaggaagagagaggaggagcagctgatagtgacgccgctgggagcg
gggaacgaagtagggcggtcgtgcgtttacatgagctacaaaggaaagaccatcctcttc
gattgcggcatccaccctgcctactacggcatggcggctctcccttacttcgacgagatc
gatccctcaaccgtcgacgtcctcctcatcactcacttccatctcgaccacgccgcctcc
ttgccttacttccttcagaagaccaccttccgcggccgcgtcttcatgacctacgccacc
aaagctatctacaagctcctcctctccgattatgtcaaggtcagcaaggtctccgttgag
gacatgctctacgacgagcacgacatcaaccgctccatggataaaatcgaggttattgat
ttccatcaaactatagaagtgaacggtattcgattctggtgttatactgcaggccatgta
cttggtgctgctatgttcatggtggacattgctggagtccgagtgctttacaccggagac
tattcacgggaggaagaccggcatcttcgagctgccgagaccccccagttctccccggat
atatgcattatagagtccacatatggtgtgcagcaccatcagcctcggcacacacgagag
aaacgcttcactgatgttatccattccaccatttctcaaggaggtcgtgtgttgattccg
gcatttgcccttggtcgtgcacaggagctcctccttatccttgatgaatattgggcgaat
cacccggagctccagaatatacccatctattatgcttctcctcttgcaaaaaaatgcctg
actgtgtatgagacatacaccctttccatgaatgataggatcaagaatgcaaagtcgaat
ccatttgctttcaaatacatatcggctttgagcagcattgaagtcttcaaagatatagga
ccatctgtggtgatggcaagccctagtggtcttcagagtgggttgtcaaggcaattattc
gatatgtggtgctctgataagaaaaattcttgcattataccggggtatgtggttgaaggg
acattggcaaaaaccatcatcagtgaacccaaagaggtcactctcatgaatgggcttact
gcacctctcaacatgcaggtgcactacatttccttttcggctcatgctgattctgctcaa
acaagtgcattcttagaagagctcaatcctcctaacataattcttgttcatggggaagct
aatgagatgggaaggctcaaacagaagctcatgagtcaatttgctgatcggaacactaag
attcttactccaaaaaactgtcaatctgttgagatgtatttcaattcgcagaaaatggca
aaaaccattggcaagcttgctgaaaaaacgcccgaagccggtgaaactgttagtggtctg
ctagtgaaaaaaggctttgcatatcagataatggcacctgatgatctccatgtcttctca
cagttatcaacagcaagcattgctcagaggatcaccatcccttattcaggtgcctttagt
attatacagcatagactaaaacagatatatgagagtgtggagtcctctgtggatgaagaa
tctggagttccaacattgcaagtccatgagtgtgtgacggtgaagcatgagtccgagaag
catgtttccctgcattggtcatccgatcccatcagtgacatggtatcagactccattgtt
gctctaattttaaacatcagtcgcgatgccccaaaaataatagacgattcagatgccata
aaaattgtagaagagaatgagaagaaagcagagaaggttatgcatgcacttcttgtctcg
ctctttggagatgtaaagattggagaaaatgggaagttggtgattaacattgatggcaat
gtggcagagctcaataaagaaagtggagaagttgagagtgaaaatgaaggccttaaggaa
agagttaaaaccgcatttcggcggattcaaagttctgtgaagccgattcctccttctgca
gcgtag
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integrated database retrieval system
