KEGG   Arachis ipaensis: 107612294
Entry
107612294         CDS       T04301                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
aip  Arachis ipaensis
Pathway
aip03013  Nucleocytoplasmic transport
aip03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107612294
  09122 Translation
   03013 Nucleocytoplasmic transport
    107612294
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aip03019]
    107612294
   03041 Spliceosome [BR:aip03041]
    107612294
Messenger RNA biogenesis [BR:aip03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107612294
Spliceosome [BR:aip03041]
 Complex C
  Other components
   EJC/TREX
    107612294
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107612294
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 WD40_RFWD3 eIF2A Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Tricorn_2nd Beta-prop_DCAF12 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT80_2nd Beta-prop_WDR41 Beta-prop_ACSF4 Beta-prop_Nup120_160 DUF7099 WD_LRWD1 Beta-prop_WDR11_1st CNH PROPPIN
Other DBs
NCBI-GeneID: 107612294
NCBI-ProteinID: XP_016169578
LinkDB
Position
B01:6334416..6338607
AA seq 313 aa
MDEKIPFKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIE
LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT
HVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLSYPSL
RPLDTLMAHTAGCYCIAIDPVGRYFAVGSADSLVSLWDISEMMCVHTFTKLEWPVRTISF
NYTGDLIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQA
DEGVFRIFGFESA
NT seq 942 nt   +upstreamnt  +downstreamnt
atggacgaaaaaatccccttcaagaatctgcatagcagagagtactctggtcacaagaag
aaggtgcactctgtggcatggaactgcattggaacaaaactcgcttctggctctgttgat
caaactgctcgaatctggcatattgagccacatggccatggtaaggtcaaagatatcgaa
ttgaagggtcacactgatagtgtagatcagctatgttgggaccccaaacatgctgatctg
attgcaactgcatcgggtgacaagaccgttcgtttgtgggatgctcgtagtggaaaatgc
tcacaacaggcagaacttagtggggagaatatcaatattacctacaaacctgatgggact
catgtagctgtaggcaatagggatgatgagttaacaatattggatgtccggaagttcaaa
ccaattcataggcggaagttcaattacgaggtaaatgagattgcttggaacatgacagga
gagatgttctttctaacaacaggaaatgggactgtggaagtactgtcttatccatctctt
cgacctcttgataccctcatggctcatacagctggttgttattgcatcgcaatcgaccca
gtaggaagatattttgctgttggaagtgctgattcccttgttagcttgtgggatatctca
gagatgatgtgtgttcatacattcacaaagctcgaatggcctgttcggacaatcagtttc
aattatactggggatttgattgcttctgcgagtgaagacttatttatcgatatttcgaat
gtccaaactggacgaactgtgcatcagattccttgtagagctgccatgaacagtgttgag
tggaaccctaaatataatttactggcttatgctggtgatgacaaaaacaagtatcaggct
gatgaaggtgttttccgaatttttggctttgaaagtgcataa

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