KEGG   Arachis ipaensis: 107612703
Entry
107612703         CDS       T04301                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1 isoform X1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
aip  Arachis ipaensis
Pathway
aip03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107612703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aip03021]
    107612703
Enzymes [BR:aip01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107612703
Transcription machinery [BR:aip03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     107612703
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5
Other DBs
NCBI-GeneID: 107612703
NCBI-ProteinID: XP_016169897
LinkDB
Position
B08:complement(116252183..116278009)
AA seq 2119 aa
MEAVEDAPPSNVSEGEIVGIRFAMASRKEICTASISDSSISHASQLSNPFLGLPLEFGRC
ESCGTSEAGKCEGHFGYIELPVPIFHPSHVVELKRMLSLICLNCLKLKKTKFPGSSSVLA
QKLLSSSCCQDVNAAQVSIREIKTDGAYGLVLKAPKPKFKMNAGFWSFLHKYGYRYEIDH
TRALLPCEVMEMIKRFSPETKKKLAGKGYFPQDGYVLKYLPVPPNCLSVPVVSDGVSVMS
SDPSITILRKLLRKVEIIRGSRSGEPNFESHLVEANELQSLFDQYLQVRGTSKPARDIET
HYGVNKELNDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKRINEIGIPLEVAQRITF
EERVSMHNMRYLQKLVDENLCLTYKEGMSTYSLREGSKGHIYLKPGQIVHRRIMDGDIVF
INRPPTTHKHSLQALAVYIHNDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVLE
LFSVEKQLLSSHSGNLNLQLTSDSLLSLKTLMKKCFLNRATAQQLAMFLSVPLPPPALLK
RRSGNSYWSAMQLLQCALPSSFDCTGGRYLIRQSEILEFDLSRDILPTTINEIAASIFFG
KGPKEALSFFDLIQPLLMESIFAEGFSFGLQDFSVSRAAKRGINRNIGKVSSLLGQLRSI
YNELVAQQVERHIQDLERPVINSALKSSKLGDLIDSKSRGAIDKVVQQIGFLGQQLFERG
RFYSKGLIEDIAIHFRLKCCYDEDSYPSAEYGLLKGCFFHGLDPYEELVHSVSTREIIVR
SSRGLSEPGTLFKNLMAILRDVMICYDGTVRNVCSNSVIQFDYGKQAGDVTQHLFPAGEP
VGVLAATSMSNPAYKAVLDASPSSNSSWELMKEILLCKVNFRNEPNDRRVILYLNDCGCG
KIYCRENAAYSVKNQLGKVSLKDAAVEFIIEYQQQRRLRESSEIGAGLIGHIHLNEVMLK
KLKINLEEIFQRCQDRVMSFYKKKKVSSIFKRIALDVSSECCSCSHSSAPCVTFLWQDDD
MNELNVTANILSDTVYPALLETIIKGDPRIRSANIIWVNSDTNTWVRNPGKSPNGELALD
IALEKAAVKQSGDAWRIVIDSCLPVIHLIDTRRSIPYAIKQIQELFGISCTFDQAIQRLA
SSVKMVAKGVLREHLVLLASSMTCGGNLVGFNTGGYKALARQLNIQVPFTDATLFTPRKC
FERAAEKCHTDSLSSIVASCSWGKHVAVGTGSRFDILWNANEINSKEIRGMDVYNFLHMV
KSVNGEEENNACLGEDIDDLLDEDDVDFAVSPQHNSGFEAVFEENCDLLNGSTANGWDTD
QNEAKSNDWSAWGGGNKVETKGGASKDWDASIGEAKEKSNDWSAWGGGNITETKDGASKA
WDSSIGEAKEKTNDWSAWGGGNKAETKDSASKAWGASTGEAKEKPNDWSASAGNKSVIHD
GGSERAPKDSWRPQKLMSDVNQGDYTKPSSWDANTDREKTPSNDWSAWGGSKSGTQDGGF
EKAPEGSWNQKLKSVQKDFSDSSAWNAKQDEKQSNDWSSRRIQDGGFERAQEDTWNANTE
PARTKSHDWSNRGHNKSQFQDDSQKSGAWGAKPDQTRSSDRSNWRQNKSQVQDDSQTSSA
WGSRPNQTKTSWGQDKSQAQDNSQTSSAWGSRPNQTKTSWGQDKSQAQDDSPNSSAWRAK
PDETLTSDWSCWGQNKSQAQNDNQKSSAWGAKPDQTKGSDWSNWGQNKSQAQEDSWKSEK
SGAWDMNADQPKASSNDWHARAGNKSQMQDGGSEGAQENSWGARKWKAEDKVRAAVIQND
TSRSGEWSSWGSNNNKGEPKVGDDGIPVESNAWAHKSENVNVNQSKEIESNWDAKKPVDN
SSWGRPKSQEDRPWNTQNESNQAASSQGWESQIASANADSDKSFQWGKRGRESFKKNRFE
GSQGWGSNAGDRQNKGRPPRTPGSRLDIYTSEEQEVLKDIEPIMQSIRRIMQQEGYNDGD
PLAADDQTFILENVFEHHPDKENKMGAGIEHVMIDKHSVYQESKCFYVVLKDGEKRDFSY
RKCLGNFITKKYPDVAESFVGKYFRKPRPRGDQASTPGLSEQATTPGLSEQAAAPGLLGP
APTPGSSEQAPNPGLVETN
NT seq 6360 nt   +upstreamnt  +downstreamnt
atggaagcagtagaggatgctcctccttcaaatgtttcagagggagagattgttgggatc
cgattcgcaatggcttcacgcaaggagatttgtacagcatccattagtgactcttcaatt
agtcatgctagtcagttgtcgaatccattccttgggctaccccttgaatttggcagatgt
gaatcttgtggtacttctgaagcaggaaaatgtgaaggtcactttggatatattgagcta
ccagttccaatattccatcccagtcatgtcgttgaattgaaacggatgctgagcttgatc
tgcttaaactgcttaaaactgaagaaaactaagtttccaggttcaagcagtgtgttggca
cagaaattgttatcatcttcatgttgtcaggatgtgaatgctgctcaagtttctattcgg
gagatcaaaacagatggggcttacggcttggtgctgaaggcacctaagcctaaattcaag
atgaatgctggattttggagctttttacataaatatggctatcgctatgagattgatcat
actcgagctttgcttccttgtgaggtgatggaaatgattaagaggttttctccagagacc
aaaaagaagcttgctggtaaaggatattttccccaggatggatatgttttgaagtatctt
cctgtaccaccaaactgcttgtctgtgccagtagtttctgatggagtcagtgtcatgtct
tcggatccttctattactattcttagaaaattgctcaggaaggtggaaatcatcagaggg
tctagatctggtgaaccaaactttgagtctcatttggtggaagcaaatgagttgcagtca
ctgtttgatcagtaccttcaagttaggggtacttctaagccagcacgtgatattgaaacc
cattatggtgtcaataaagaacttaatgattcttctacaaaggcatggctggaaaaaatg
aggaccttatttataaggaagggttctggcttttcttcacgcaatgtgataactggagat
ggttataagaggataaatgagatagggattcctcttgaggtagcacaaaggataacattt
gaggagagagttagcatgcataacatgaggtacttacagaagttagttgatgaaaatttg
tgcctaacttacaaggaaggtatgtcgacatattcactaagggagggctcaaaggggcac
atatatctcaaaccaggccaaatagtgcatagaaggattatggatggtgatattgtcttc
atcaacagaccacctacaacacacaaacattcattacaagcacttgctgtgtacatccac
aatgaccacaccgttaagataaatcctctcatttgtgggcccctaggagctgattttgat
ggtgactgtgtccatctattttatccacagtcccttgctgctaaagctgaggtactggag
ctattctctgtggagaaacagcttcttagttcacacagtggtaatctaaacctccagttg
acctctgattcgttgctctcactgaagactttgatgaagaaatgctttttgaatagagcg
acagcacagcaattagcaatgtttctttctgtacctctgccaccgcctgctttactcaaa
cgcagatctggtaattcatactggtctgccatgcaactattacaatgtgcgttgccctca
tcttttgattgcactggcggtagatacttaatcaggcagagtgagatcttagaatttgat
ctcagtagggacattttgccaacaacaataaatgaaatagctgcttcaattttcttcgga
aagggccctaaggaagcactcagtttctttgatttgatacagccccttttaatggaaagc
atatttgctgaaggctttagctttggcttacaagatttttcagtatctagggcagcaaag
cgaggaataaatagaaatattgggaaagtttcttcattgttgggtcaactcaggtcaata
tacaatgagctggttgcacagcaagtggaaagacacattcaggatcttgaacgaccagtt
attaattctgctctaaagtcgagcaaacttggggatttgattgactcaaagagtaggggg
gccattgacaaggtggttcaacaaattggtttcttaggccagcagctttttgagagaggg
agattctattccaagggcttaattgaggatatagccattcattttcgtctaaagtgttgt
tacgatgaggatagctacccttctgctgaatatggcttactcaaagggtgcttttttcat
ggtttggatccatatgaagagttggtgcattcagtttctacaagggaaataattgtgcgt
tcctcaagaggattatctgaacccggaacactgttcaagaacttaatggccatcctccgt
gatgtcatgatttgctatgatgggactgttagaaatgtttgtagcaattccgtcattcag
tttgattatgggaagcaagctggagatgtgacccaacatttattccctgctggtgagcct
gtaggtgtcttagccgcaacttctatgtcaaatcctgcttataaggcagtccttgatgcc
agtcctagcagcaattcttcatgggaattgatgaaggagatactgctctgcaaggtcaat
tttaggaatgaaccaaatgatcgtcgtgtaattttgtacttgaatgattgtggctgtggg
aagatttattgccgagaaaatgctgcttattcagtaaaaaaccaattgggaaaagtcagt
ctcaaggatgcagcagtggagttcattattgaatatcagcaacagcggcgtctcagggaa
agctcagaaattggtgcaggccttattggtcatattcatttgaacgaggtaatgttaaag
aagctgaagatcaatttggaggaaatttttcaaagatgccaagatagagttatgtccttt
tacaagaagaagaaagttagtagtattttcaagaggattgcactggatgtcagcagtgag
tgttgctcttgctcgcattcttcagcaccgtgtgtaacgttcctttggcaagatgatgat
atgaatgagttaaatgtaactgcaaacattctgtctgacacagtctatccagctctgctt
gaaacaataatcaaaggtgatcctcgaattcgctcggcgaatataatctgggttaattcg
gacacaaacacatgggttcgaaaccccggtaaatctccaaatggtgaattggcgctagat
attgctcttgagaaggcagctgttaaacaaagtggtgatgcttggaggattgtaattgac
tcctgccttcctgttattcacttgattgatacaaggcgttcgataccttatgcaatcaag
caaattcaggagctatttgggatctcatgtacttttgatcaagcaattcagcgtcttgca
tcatctgtgaaaatggtggcaaaaggtgttctccgtgagcatcttgttcttttagctagc
agtatgacatgtggtggaaatttggttgggttcaatacgggtggatataaagctcttgct
cgtcaattaaacattcaagtaccttttactgatgcaacactctttacacctagaaaatgt
tttgagcgagcagctgagaaatgtcatacggactctttatcaagcatagttgcctcctgt
tcttggggtaaacatgttgcagttggtacaggatcaagatttgatattctatggaatgcg
aatgaaataaattcaaaggagattcgagggatggatgtttacaattttcttcacatggtc
aaaagcgttaatggcgaagaggaaaataatgcttgtttgggtgaagacattgatgatttg
ctagacgaagacgatgtagactttgctgtgtccccacagcataactctggttttgaagct
gtttttgaagagaattgtgacctattgaatggttcaacagccaatggttgggatacagat
caaaatgaagcaaagtcaaatgattggtcagcctggggaggtgggaacaaagttgaaaca
aaaggcggtgcatccaaggattgggatgcaagcataggtgaagccaaagaaaaatcaaat
gattggtcagcatggggaggagggaatataactgaaacaaaagatggtgcatccaaggct
tgggattcaagcataggtgaagccaaagaaaaaacaaatgattggtcagcctggggagga
gggaataaagctgaaacaaaagacagtgcctccaaggcttggggtgcaagcacaggtgaa
gccaaagaaaaaccaaatgattggtcagcatcggctggaaacaaatctgtaatacatgat
ggcggatctgaaagagcaccaaaagattcttggaggccacagaagttgatgtctgatgtt
aatcaaggagactatactaagccaagttcttgggatgcaaatacagatcgggaaaaaaca
ccatcaaatgattggtcagcatggggtggaagcaaatctggtacacaggatggtggattt
gaaaaagccccagagggttcctggaatcagaagttaaaatctgtccagaaagacttttcc
gattccagtgcttggaatgcaaaacaggatgagaaacagtcaaatgactggtcatctagg
agaattcaggatggtggttttgaaagggcccaagaggatacttggaatgccaacacagaa
ccagcaagaacaaaatcacatgactggtcaaataggggccataataaatctcaatttcaa
gatgattctcagaagtctggtgcttggggtgcaaaaccagatcagacaagatcaagtgac
cggtcgaattggcggcaaaataaatctcaagttcaagatgattctcagacttctagtgcc
tggggttcaagaccaaatcagacaaaaaccagttggggtcaagataaatctcaagctcaa
gataattctcagacttctagtgcctggggttcaagaccaaatcagacaaaaaccagttgg
ggtcaagataaatctcaagctcaagatgattctcctaactccagtgcttggcgtgcaaaa
ccagatgagacactgacaagtgattggtcctgttggggtcaaaacaaatctcaagctcaa
aatgataaccagaagtcgagtgcttggggtgcgaaaccagatcagacaaaaggaagtgat
tggtccaattggggccaaaataaatctcaagctcaggaggattcttggaagtctgagaag
tccggtgcttgggacatgaatgcagatcagccaaaagcaagttcaaatgattggcacgca
agggctggaaataaatctcaaatgcaagatggtggatctgagggagcccaagagaattct
tggggagctcgtaagtggaaagctgaagataaggtcagagcagctgttattcaaaatgat
acatctaggtctggtgaatggtcatcatggggaagtaataacaacaaaggtgaaccaaag
gtcggagatgatggtataccggtggagtccaatgcttgggcccataaatctgagaatgtg
aatgtgaaccagagtaaggaaattgaatcaaattgggatgctaagaagcctgttgacaat
agctcttggggaagacccaagtcccaggaagaccgaccatggaatacccagaatgaatcc
aatcaagctgcaagttcacaggggtgggaatcacaaattgcttcagccaatgccgacagt
gacaaaagttttcagtggggaaaacgaggcagggaatcattcaagaaaaatcgtttcgaa
ggttctcaaggttggggttcaaatgctggtgacaggcagaacaagggtcgccctcctaga
acacctggatcaaggttggatatatacacatctgaggagcaagaggttttgaaggatatt
gaacccattatgcagtcaatcagacgaatcatgcaacaagaagggtacaatgatggggat
ccattagcagcagatgatcaaacatttatacttgagaatgtgtttgaacaccatccagat
aaagaaaataaaatgggtgctggaattgaacatgtcatgattgacaaacacagcgtttat
caggaaagcaaatgtttttacgtggttttgaaggatggagaaaaaagggacttttcttat
cgtaaatgtttaggcaacttcataacgaagaagtatccggatgttgctgaatcgttcgtc
ggcaagtacttccgtaagcctcgtccaaggggggatcaggcctcaactccaggattgtca
gaacaagccacaactccagggttgtcggaacaggccgcagctccagggttgctaggacca
gctccaactccagggtcgtcggaacaggcccccaatcccggtttggtggaaacaaactag

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