Arachis ipaensis: 107612863
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Entry
107612863 CDS
T04301
Name
(RefSeq) uncharacterized protein LOC107612863
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107612863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107612863
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107612863
mRNA degradation factors
5'-3' decay
Decapping complex
107612863
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
TFIIA
Motif
Other DBs
NCBI-GeneID:
107612863
NCBI-ProteinID:
XP_016170111
LinkDB
All DBs
Position
B08
Genome browser
AA seq
827 aa
AA seq
DB search
MVDMDVFGAGGNLGGAPTTEDLRQLGGASSENAVFDASQYDFFGKDFVEEVELGGLEDED
GELPPVGFDEEEEIFFNREEGDDLRSTSEVDDLTTTFSKLNKDVSGSSAGLIGEHGSREN
SSAAERAHRDDIYNWYDQHDYDSEGGQDLKRWSSQPHNSLALLQESKGLLYRTSSYPDQQ
QHQHFSSEPIMVPKSSFSSYPHFGGMQQQDSPNQSMGHLNIPFHAGGSQMPMSSPNQSHL
PNSQIPLAGLSHGSHFGGNLHQFPSGSPVNNRMPNQWLNQGELYSGDPPNILNNLLQQQL
PLHNGSIPPHLVTQMQQQQQQQQQQQRMRPPQPSTGYLPGLQSHLFNPSISSGLPFDQMA
GLMELRDQIPKSAQRGRQNFRFPPQGFDISNMKSNIGWPRFRSKHMSTEEIENILRVQLA
ATHSNDPYVDDYYNQACLAKRSAGAKLRHHFCPNQIRELPLRASTNTEQHAFLQVDALGR
VPFSSIRRPRPLLEVDPPNSSPAGGNEQNISEKPLEKEPMLAARVTIEDGLCLLLDVDDI
DRFLQFNQLQDGGIQLKRKRQSLLEGLAASLQLVDPLGKTGHTVGLAAKDDLVFLRIVSL
PKGRKLLAKYLQLLFPGGELMRIVCMAIFRHLRFLFGGLPSDPVAAETVSNLARVVSKCI
REMDLGALSACLAAVVCSSEQPPLRPLGSPAGDGASLVLVSVLEKATELLTDPHAASHYN
IANRSLWQASFDEFFGLLTKYCVTKYDSVMQSLLVQGIPNMGGIGSDAARAISREMPVEL
LRASLPHTDDRQKKLLLDFAQRSMPVVGFNSNGGGNGGHVNSESVLS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggtggatatggatgtgtttggagctgggggtaatcttggaggagctcctaccacagag
gatcttaggcaattagggggtgcttcctcagaaaatgcagtatttgatgcatcacaatat
gacttttttggaaaagattttgttgaggaagtggagttggggggtttagaagatgaagat
ggtgaattgcctcccgttggatttgatgaagaggaggagatttttttcaatagagaagag
ggtgacgatttaagatctacttcagaggttgatgatctcacaacaacattttcaaagttg
aacaaggatgttagtgggtcaagtgctggactcattggtgaacatggatcaagagaaaat
tcatctgctgctgaacgggcacatagggatgatatttataattggtatgatcagcatgat
tatgacagtgaaggtggtcaagatctcaaaagatggtcatcacaaccacataattcattg
gctctgttacaagagtctaagggcttgttgtatagaacatcctcatatcctgatcagcag
caacatcaacatttttctagtgaaccaattatggtgccaaaatcttctttttcttcttat
cctcactttggtggcatgcaacaacaagattccccaaatcagagcatgggccatctgaat
atcccatttcatgctggtgggtctcagatgccaatgtcgtcacctaatcaatctcatttg
cctaactcccagatcccattggctggcctttcccatgggtctcattttggtgggaatttg
catcagtttcctagtggatctcctgttaataatcgaatgccgaatcaatggctcaaccaa
ggtgaattatattctggagatcctcccaacattctgaacaatttattgcagcagcaatta
cctcttcataatggatcaatacctcctcacttagtgactcagatgcagcagcagcagcag
caacagcaacagcagcagaggatgcgtccccctcagccttcaacaggatatttacctggt
ttgcagtcccatttatttaaccctagtatttcctcaggtttaccctttgatcagatggct
gggctaatggaactaagggatcaaataccaaaatcagctcaaagaggtagacagaacttt
cggttcccccctcagggttttgatataagtaacatgaagagtaatatcggatggcctcga
tttaggtctaagcatatgtcaactgaggaaattgagaatattctgagagtgcagcttgca
gcaactcatagtaatgatccatatgtagatgattattacaaccaagcctgtcttgcgaaa
agatcagcaggtgctaagctgaggcatcacttttgtccaaatcaaataagggaactccct
ctgcgagcctctactaatactgaacaacatgcatttcttcaggttgatgctctaggaagg
gttcctttctcatcaatccggaggccccgtcctcttctagaagttgatcctccaaattcc
tctccagctggtggcaatgagcaaaatatatcagagaagccccttgaaaaggagccaatg
cttgcagcaagggtcacaattgaggatggtctttgtcttcttcttgatgtagatgatatt
gatcgtttcctacagtttaatcagcttcaggatggtggaattcagttaaaacggaagcgg
cagagtcttctggaaggacttgcagcatcacttcagttagttgatccactgggaaagact
ggacatacagttgggcttgctgcaaaagatgaccttgtgtttctcaggatagtttctcta
cccaagggtcggaagcttcttgctaagtatcttcagctgctttttccaggtggtgagcta
atgcgaattgtgtgcatggcaatctttcgtcatttgagattcttatttggtggtcttccc
tcagatccagttgctgcagaaactgtaagtaaccttgcaagggttgtttcaaagtgcatc
cgtgaaatggatcttggtgcactaagtgcttgtctagcagcagttgtttgttcttctgag
cagcctcctctacgtccacttggaagccctgctggagatggggcttcccttgttttggtg
tctgtgcttgagaaggcaactgaacttctgactgatcctcatgctgctagccattataat
attgcaaatcgttccctttggcaggcttcatttgatgaattctttggccttctgaccaag
tattgtgtgaccaaatatgacagtgtcatgcaatcattgcttgttcaaggtataccaaat
atgggtggtattggctcagatgctgccagagctattagtagggaaatgccagttgagctc
ttacgggccagtctaccccacactgatgatcgccagaaaaagctattgcttgattttgct
cagcgctctatgcccgtagttggattcaacagtaatggtggcggtaatggcggccatgtg
aactcggagtcagtgctgagttga
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