Arachis ipaensis: 107613102
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Entry
107613102 CDS
T04301
Name
(RefSeq) protein CHROMATIN REMODELING 35 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
aip
Arachis ipaensis
Pathway
aip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107613102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aip03400
]
107613102
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107613102
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
RAG1_imp_bd
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
107613102
NCBI-ProteinID:
XP_016170442
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Position
B08:complement(119429584..119436753)
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AA seq
866 aa
AA seq
DB search
MGSTVDTLPAKRPAPTEYSSEGHKRLKLSSDGSPYSNVVDYSDPFAISAVLNRLDSGEFG
SVTKDIEALRVQKMQMLGPYFAKYPSLINQLLKVATNHTEETVKLEFEPVTSAHQGVIKL
EGGQIKKNVPAAPTSIVIIDSDDEDDNDKNSDPRFHQVVLPAPVRPSPALQMNGHASIEF
DEKSKVPKIEKSLDGQDTSPRDKGIYVGIQEEEDEVEEKDDGLGDIWREMSMAIECSKDA
SMDVLDEEEEKEEDCDHSFVLKDDLGYVCRVCGVIERRIETIFEFQYKVKRSTRTYASDS
WSSKEKAAMHGIHVAEDDLVVTDISAHPRHMKQMKPHQVEGFNFLVRNLAGDNPGGCILA
HAPGSGKTFMIISFMQSFLGKYPNGRPLVVLPKGILSIWKKEFQRWQVEDIPLLDFYSVK
ADNRSQQLEVLKKWKDQKSILFLGYKQFSTVVCDDSTSRASVDCQEILLKVPSILILDEG
HTPRNENTDIMQSLSKVRTPRKVVLSGTLYQNHVQEVFNILDLVRPPKFLKMETSKPIVK
RIYSRVHVPGVRNFCDLVEHTLQKDTDFRRKVAVIQDLREMTSKVLHYYKGDFLDELPGM
VDFTVVLNLTSRQKHEVEKLKRLSRKFKISSVGSATYLHPKLKPVAEKCGENSISDNIID
ELIDKLDVKDGVKSKFFRNMLNLCESAGEKLLVFSQYLLPLKYLERLAVKWNGWSLGKEI
FVISGESSPEQREWSMEKFNSSSDAKVFFGSIKACGEGISLVGASRVIIMDVHLNPSVTR
QAIGRAFRPGQTKKVFVYRLLAADSPEEEDHATCFKKELISKMWFEWNEYCGDSAFEVES
VPVKECGDFFLESNSLAEDVKALYRR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgacggtggatacactcccagctaaacgtcccgctccaactgaatattcttct
gagggacacaaaagactgaaattgtcatctgatggctccccatactcaaatgttgtggat
tacagtgacccatttgcaatatctgctgttctgaaccggcttgacagtggggaatttgga
agtgtcacgaaggacatagaggccctcagagtgcagaaaatgcaaatgttgggaccatac
tttgcaaaatatccttccctgatcaatcaattattgaaagtggcaactaaccatactgaa
gaaactgtcaaattggaatttgaaccagttactagtgcacatcagggtgtgataaagttg
gagggtgggcaaattaagaagaatgttcctgcagccccaacatctatcgtaattattgat
tcagatgatgaggatgataatgataaaaattctgatcctcgatttcatcaagtagtgtta
cctgcaccagtaagaccatctcctgcgctgcagatgaatggtcatgcttccattgaattc
gatgagaaaagtaaagttccaaaaattgagaaaagtctggatggtcaagatacgagtccc
agagacaaaggtatctatgttggtatacaggaggaagaagatgaggttgaagagaaagat
gatggcttaggtgatatttggagggaaatgtcaatggctatagaatgttccaaggatgct
tctatggatgtgctcgatgaagaagaggaaaaggaggaagactgtgatcattcttttgtt
ttaaaagacgatcttggttatgtttgtcgtgtatgtggggttatcgaaagaagaattgag
accatatttgagtttcagtacaaggttaaaaggagtacaaggacttatgcatctgattca
tggagttccaaagagaaagctgcgatgcatgggatccacgtagctgaagatgatcttgta
gtgactgatatttctgcacacccgagacatatgaagcaaatgaagccacatcaagtcgag
ggattcaattttctcgtgaggaacctcgcgggtgataatcctgggggttgcatcttggct
catgctcctggatcagggaagactttcatgataattagtttcatgcaaagttttctgggc
aaatatcccaatggtagaccgctagtggtgcttcccaagggaatactatcaatttggaaa
aaagaattccagagatggcaagttgaggatataccacttctggatttttacagtgtgaag
gctgacaatagatctcagcaactggaagttttgaaaaaatggaaggaccagaagagtatc
cttttcttaggatacaaacagttctccacagttgtatgcgatgattccaccagcagagca
tcagtagactgccaggagatattgcttaaggttccttctattctcattttagatgaaggg
cacactccaaggaatgagaatactgatatcatgcagtccctttccaaagttcgaacacct
cgaaaagttgtactgtcaggaactttatatcagaatcatgtgcaggaggtgtttaacatc
ttagatctggtgcggccgccaaaatttttgaagatggaaacttctaagcctattgtcaag
cgcatttatagcagagtgcatgtacctggtgttcgaaacttctgtgatttagtcgaacat
actttgcagaaggatactgatttcagaagaaaggtggccgtcattcaagatttgcgtgag
atgacaagcaaggtgcttcactactataaaggagattttctggacgagcttcctggtatg
gttgatttcacagtggtgctcaaccttacctctagacagaagcatgaagttgagaaattg
aagaggctttccaggaagttcaaaatatcttctgttggcagtgctacctatcttcatcct
aagttgaaacctgttgctgaaaaatgtggtgagaactccatatctgataacatcatcgat
gagttgattgataaattagatgtgaaagatggggtgaagtcaaaattctttcgcaacatg
ctcaacttgtgcgagtctgctggggagaagcttctggttttcagtcaatatctcctacct
ctgaaatatttggaaaggttagcagtaaaatggaatggatggagccttggcaaagaaatt
tttgtcatctcaggagaatcaagccctgaacaacgtgagtggtcaatggaaaagttcaac
agctcgtctgatgccaaagtcttctttggctcaatcaaggcatgtggggagggcatatca
ctggttggggcatcccgcgtaatcattatggatgttcatctcaatccatcagttactcgc
caagctattggccgtgcattccgaccaggtcagacaaagaaagtctttgtatatcggttg
ttggcagcagattctccagaagaggaagatcacgctacttgtttcaagaaggagttgatt
tcaaagatgtggtttgaatggaatgagtattgtggtgatagcgctttcgaagtggagagc
gtccctgtgaaagaatgtggtgatttcttcctcgaaagtaattcattagctgaagatgtt
aaagctctatatagaaggtag
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