Arachis ipaensis: 107613298
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Entry
107613298 CDS
T04301
Name
(RefSeq) chaperone protein ClpD, chloroplastic
Organism
aip
Arachis ipaensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_16
Sigma54_activat
IstB_IS21
nSTAND3
AAA_22
AAA_25
AAA_7
AAA_14
RuvB_N
NACHT
AAA_33
Zeta_toxin
Torsin
Motif
Other DBs
NCBI-GeneID:
107613298
NCBI-ProteinID:
XP_016170729
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All DBs
Position
B08:complement(128084639..128090204)
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AA seq
982 aa
AA seq
DB search
MQVSSSPVSSPWFRVSFGSKSRYNQRFQSESCSTSSTATVTASYYNSPCINVLFSRAAPA
RCRINTTSTGTATAATSLSFLVNQRNAFTAVVRSPIAIGGGGGGRKVIKKRRVFTVSAVF
ERFTERAIKAIMFSQKEAKSLGSDLVYTQHLLLGLIAEEDRSTDGFLASGITVEKARDAV
RSIWQRIGSTRDDARDAGEKGGSASHVPFSISAKRVFEAAVEYSKSLGHKFVAPEHIAVA
LVKVDDGSASRVLYRLGANGGQLAAVAFSRLQKEIAKDGREPNADSKGLHDKSIARKRYG
AGSSAATTKEPDAISQFCADLTARASEGLIDPVIGRDTEVQRIVQILCRKTKCNPILLGE
PGVGKTALAEGLAIRIAKADVSPFLLTKRVMSLDVALLMAGAKERGELEERVTNLIKEII
SAGDIILFIDEVHTLVQSGTSGKGNKGSGLDISNLLKPALSRGQLQCIASTTIDEYRLHF
EKDKALARRFQPVWVDEPIEDDAVKILMGLREKYESHHKCIYTEDALKAAVQLSARYIVD
RYLPDKAIDLIDEAGSRAHIEAFKKRKEQETCVLSKDPADYWQEIKDVQSMHEMESKLKY
YGASSIDDSNELILDSYLASEANENEPVIVGPEEVALVASLWSGIPVQQLTADQRTLLLD
LENQLRKRVIGQEEAVTAISKAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELAKSLAAC
YFGSEAAMIRLDMSEYMERHTVSKLIGSPPGYVGYGEGGILTEAIRRKPFTLVLLDEIEK
AHPDIFNILLQLLEDGQLTDSQGRRVSFKNALVVMTSNIGSSAISKGRHNSIGFLIQDDK
KASYSGLKSMVMEELRNYFRPELLNRIDEVVVFQPLEKSQLLEILNLLVQDIKKRVMLLG
IDLKVSEAVKDLVCQEGYNPTYGARPLKRAITSIIEDPLSEAFLVGQFKQGDTVLIDLDA
NGNPFVTNQLDKIINISDASHP
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtttcatcctcaccggttagctcaccgtggttccgagtcagcttcggttcgaaa
agccgttacaaccaacgtttccaatcggagtcatgctcaacttcttcaaccgccactgta
actgcctcctattacaactctccatgtattaacgtcctcttctcacgcgccgctccagcg
cgttgcagaatcaacaccacctccacgggtaccgccaccgctgcaacctcgctctcgttt
ttggttaatcagagaaacgccttcaccgcggtggtgcgttcgccgatcgcaatcggcggc
ggcggcggtggcaggaaggtaattaagaagcgaagagtcttcaccgtttccgcggttttc
gagcggttcacggaacgagcaataaaagcgataatgttttcgcaaaaggaagcgaaatcg
ctgggaagtgacttggtttacacgcagcaccttctgttagggctcatcgctgaagaggat
cgttcaaccgacgggtttcttgcgtctggtataacggttgagaaggcacgtgatgccgtc
cgaagtatatggcagaggattggttccacacgtgacgacgcacgtgatgctggcgagaaa
ggtggttcggcgagtcacgtgcctttttctattagcgcaaagcgtgtttttgaggcggct
gttgaatattcaaagtctcttgggcataagtttgttgctcctgaacatatagcagttgct
ttggttaaagttgatgatggaagtgctagtcgagtcctttatagattgggggcaaatgga
ggccagttggcagctgtggcattctccagattgcaaaaggagattgctaaagatggtagg
gagccaaatgcggattccaagggattgcatgacaaatccatagcaagaaaacgttatggt
gcagggtcctctgccgccaccaccaaagaaccggatgccatctcacaattttgtgccgat
ctcactgctcgtgcgagtgaaggactaatcgatcctgttattggccgagataccgaggtg
cagagaattgttcaaatactgtgccggaaaacaaaatgcaatcccattcttcttggtgaa
cctggtgttggaaaaacagctcttgccgaagggttggcaattcgcattgctaaggcagat
gtttccccatttttattgacaaaacgtgtcatgtctttggatgttgcattgttaatggct
ggggcaaaagagagaggagagttagaggagcgtgttacaaatttaataaaagagataata
agtgcaggtgacatcattcttttcattgatgaagttcatacacttgttcagtccgggaca
agtggaaaaggaaataagggatctggccttgacatttccaatttgcttaaacctgcactt
tcaaggggtcaacttcagtgtattgcatctaccaccatcgacgaatacaggcttcatttt
gagaaagacaaggcattggcacgaagatttcaacctgtttgggttgatgagccaattgag
gatgatgcagttaagatacttatgggtctacgtgagaagtacgagtcacaccacaaatgc
atatataccgaagatgccctaaaggctgcagttcagttgtcagcgaggtacatagtcgat
aggtatctaccagataaagctattgacctcattgatgaagcaggaagtagagctcatatt
gaagcctttaagaagagaaaggaacaagaaacttgtgtactttctaaggaccctgctgat
tactggcaagaaattaaagatgtccagtcaatgcatgaaatggaaagcaagcttaaatac
tacggcgcctcaagcattgacgattctaatgaactcatactggactcatatttagcttct
gaagccaatgaaaatgaacctgttatagttggaccagaagaagtagccttagttgcttcc
ctctggtcgggaattcctgttcagcagctcactgctgaccaaagaactcttctgttagat
cttgagaatcagcttcggaaacgtgttattggacaagaggaggctgttactgccatttct
aaagctgtgaagagatccagggttggccttaaggatcctgatagacctatagctgcaatg
ttattttgtggcccaactggggttggaaaaacagaactcgcaaaatctttggcagcatgc
tactttggatcggaggcagccatgattcggttagacatgagtgaatatatggagcggcat
actgtgagcaaattgataggatcgccaccaggttatgttggttatggagaaggaggcatc
ttaactgaagctattagaagaaaaccattcacactggtactacttgatgagatagagaaa
gctcatccagatatattcaacattcttcttcagttgttagaagatggccaacttactgat
tctcagggtcggcgagtttcatttaaaaatgcattggtggtgatgacttcaaatataggg
tctagtgccatttctaagggtcggcacaactccataggtttcttgattcaagatgacaag
aaagcatcatatagtggcttgaaatcgatggtaatggaagaattgagaaattattttcgt
ccggaactgctcaacaggatagatgaagtggtagtgtttcagccccttgaaaagtcacag
ttgctggagatattgaatctgctggtgcaagacataaagaaaagggtaatgcttctagga
atagatttgaaggtttctgaagcagtgaaggaccttgtttgccaggaaggttataaccca
acatatggtgccaggcctttgaagagggccattacatcaataattgaagaccctttgagt
gaagcattccttgtaggacagttcaagcaaggtgacactgtccttattgacttggatgca
aatggtaacccctttgttacaaatcaacttgacaaaattattaacatatctgacgcaagt
catccctga
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