Arachis ipaensis: 107613399
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Entry
107613399 CDS
T04301
Name
(RefSeq) serine/arginine-rich splicing factor SR45
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
aip
Arachis ipaensis
Pathway
aip03013
Nucleocytoplasmic transport
aip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107613399
03015 mRNA surveillance pathway
107613399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107613399
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107613399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_10
RRM_ACIN1
Nup35_RRM_2
RRM_3
HU-CCDC81_euk_1
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
107613399
NCBI-ProteinID:
XP_016170855
LinkDB
All DBs
Position
B08
Genome browser
AA seq
416 aa
AA seq
DB search
MAKPGRGHRSPPSGSGSSSRSRSSSPSDSRSSSRSRSLSRSRSPSRSRSFSSSSSSPSRS
SRSRSRSPPPQRRRSSPEAARRGRSPPPQSRRASPPPRKPSPVRESLVLHVEKLSRNVNE
DHLKEIFRNFGEVVSVELAMDRTVNLPKGYGYVQFKTRADAEKALLYMDGAQIDGNVVKA
RFTLPPRQKVSSPPKASAVALKRDGPRTDNASADVEKDGPKRPRESPRRKPPPSPRRRSP
VPRRVGSPRRPDSPIRRRADSPIRRRLDSPHRRGDTPPRRRPISPGRGRSPSPPRRLRSP
ARASPRRLRGSPGRRRSPPPLRRRSPPRRARSPPRRSPISRRRSRSPIRRRSRSRSFSPR
RGRPPVRRGRSSSYSDSPSPRKVSRRSKSRSSGRPLRGRGSSNSSSSSSPPPPRKP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccggggcgaggccatcgctctccgccctcgggctccggctcctcctcccgc
tcccgttcctcttccccttcagattctcgctcttcctcccgctctcgctccctctctcga
tcccgttctccttctcgctccagatccttctcttcctcctcctcctccccgtctcgctcc
tcccgaagccgaagccgaagccctccccctcagcgccgaagaagctcccctgaagcagcc
aggcgaggtcgatctcctccccctcagtctagaagagcttctcctcctccaaggaaacct
tctcctgtacgtgaatcacttgttcttcatgtagaaaagctcagcaggaatgtcaatgaa
gaccatttgaaagaaattttccgtaactttggcgaggttgtaagtgtggagttggcaatg
gaccgaactgttaatcttccaaaaggatatggatatgtgcagtttaagacaagagcagat
gctgaaaaagctttattgtacatggatggtgcccaaatagatgggaatgttgttaaggca
agatttacactacctcctagacagaaagtttcttcaccaccaaaagcttctgctgttgct
ctgaagagagatggccctaggactgataatgctagtgcagatgttgaaaaggacgggcca
aagcggccaagagaatctcctcggagaaaacctcctccctcgccacgaaggagatctcct
gtgcctcgaagagttggatctccaagacgaccagattctccaattcgccgtcgtgcagat
tctccaattcgccgtcgattagactctcctcatcgtcgtggagacacacctcctaggagg
aggcctatatcccctgggagaggccgttctccatctccaccaaggcgtcttagatcccct
gcaagggcctctccaagaaggttgcggggaagtccaggtcgtagacgttcccctcctcct
ctaaggcgccgttcaccgcctagacgagctcgtagtcctcctagaaggtctccaataagt
cgtaggcgcagtcgctctccaatacgtagacgctcacgctcaagatcattctcacctcga
agaggtcgaccacctgtaagacgtgggaggtcttcatcctactctgactcgccaagtcca
cgcaaggtatcccggagatcgaagagtcgcagttcgggtaggcctttgagaggaagaggc
agtagcaacagcagcagcagcagttcaccacccccacctcgcaaaccctag
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