Arachis ipaensis: 107613565
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Entry
107613565 CDS
T04301
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aip
Arachis ipaensis
Pathway
aip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107613565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107613565
03036 Chromosome and associated proteins [BR:
aip03036
]
107613565
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107613565
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107613565
PBAF complex
107613565
GBAF(ncBAF) complex
107613565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
DUF4428
23ISL
C1_2
ZZ
Motif
Other DBs
NCBI-GeneID:
107613565
NCBI-ProteinID:
XP_016171119
LinkDB
All DBs
Position
B08:128953080..128956534
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AA seq
568 aa
AA seq
DB search
MELSKDPNSNPGRTEDSDSELELYTIPSSSRWFAWDEIHETERTTLREFFDGTSMSRSPK
IYKEYRDFVINKYREDPTRKLLFTDVRKSLVGDVTLLRKVFTALEGWGLINYGATSGDTD
AEGCGGGAEDEGWRVRVEEGAPNGIRVVATPNSLKPITLPRGAKTTKDGSGSGSGFSSDC
VKLPPLASYSDVYGDLMKQKEEMNCGLCGDKIGSGHYRSTKDNFMICAKCFTNKNYGDNR
SAEDFTLTESGENSGEQGAVWTEGETLLLLESVMKHGDNWDLVAQSVQTKSKLDCISKLI
ELPFGELMLGSAHRNGNSNSVNGYVNNVKQVQSSSSSSNHQETSKAQDQSHDLRNENEQN
GDAVEESPSKRQRVAPLSDTSSSLLMQVGLIASVVDPHITAAAADAATMALCDENLCPRE
IFDVEEDYALSVNSANNSARAHGDEGVEMKSSNQSEIDDRGQKDGIPLTLRVRAAIATAL
GAAAARAKLLADQEDREVELLVATIIDAQVKKLQHKVRHFDDLELLMEKEHAEIEELKDS
ILTERIDVLRRTFRSGITRRKDYSYVKS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggagctctcaaaagacccgaattccaacccgggtcgaaccgaagactccgattcggag
ctcgaactctacactatcccaagctcttcaaggtggttcgcatgggacgaaatccacgag
acagagagaacaacgctgagagaattcttcgatggaacatccatgtcgcgctcacccaag
atctacaaggagtacagagacttcgtcatcaacaagtacagggaagatcctacgaggaag
ctcctcttcaccgacgtcagaaaatcactcgtcggcgacgtcacgctcctccgcaaggtc
ttcacggcgctcgaaggttggggtttgatcaactacggcgcaacctcaggggacaccgac
gcggaaggttgtggtggtggtgctgaggacgaagggtggagggttagggttgaggaaggt
gcgcccaatgggataagggtagttgcgacaccgaactcgctgaagccgattacactgcca
cgtggcgcaaagacgactaaggatggttcgggttcgggttcgggttttagttcggattgt
gtgaaattgccgccgctggcgagttactcggatgtgtatggggatttgatgaagcagaag
gaggagatgaattgtgggctctgtggtgataaaattggttctggacattaccgaagtacc
aaggataatttcatgatttgtgcaaaatgtttcacaaataaaaattatggagataatagg
tctgcggaggatttcacattaacagagtccggtgaaaatagtggcgaacagggagctgtg
tggactgagggagaaacacttctccttttagaatctgttatgaagcatggagataactgg
gacctagttgctcaaagtgttcaaacaaagagtaaacttgattgcatctcaaaactcatt
gagctgccctttggggagctcatgttgggctctgctcaccgaaatggtaacagtaatagt
gttaatggctacgtgaacaatgtgaaacaagttcagtcatcatcatcatcgtctaaccat
caagaaacttcaaaggcgcaggatcagtctcacgatcttaggaatgaaaacgagcagaat
ggagatgctgttgaggaaagtccttcaaaaagacaacgcgttgctcctctttcagatacc
agcagttcactattgatgcaggtggggcttattgctagtgtggttgatcctcatatcaca
gcggctgcagctgatgctgctactatggcactttgtgatgagaacctgtgtccaagggag
atatttgatgttgaagaggattatgctcttagcgtgaactctgcaaataattcagcaaga
gcccatggggatgaaggtgtagagatgaagtcgtccaatcaatcagaaatagacgacaga
ggccaaaaggatggcatacccttgacactgcgtgtaagagccgccattgcaactgctctc
ggagctgctgctgcacgagcaaagttattagctgaccaggaagacagagaggttgaactt
ttagtagctactataattgacgcacaggttaagaaattgcaacacaaggttagacatttt
gatgatctggagctgttgatggaaaaggaacatgctgaaatagaggagctaaaagattct
atcttaactgaacggattgatgttttaaggaggacatttagatctggaatcactagacgg
aaagattattcttatgtcaaatcttag
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