Arachis ipaensis: 107613588
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Entry
107613588 CDS
T04301
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aip
Arachis ipaensis
Pathway
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107613588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aip03041
]
107613588
03009 Ribosome biogenesis [BR:
aip03009
]
107613588
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107613588
Spliceosome [BR:
aip03041
]
Complex A
U1 snRNP components
U1 related factors
107613588
Complex B
107613588
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
Pre-60S particles
Helicases
107613588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
107613588
NCBI-ProteinID:
XP_016171148
LinkDB
All DBs
Position
B08:complement(1153024..1156801)
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AA seq
501 aa
AA seq
DB search
MSRYDSRAADPASYRDRRSDSGLGAPPASASASASSRRDYDDGGASPRKLNLDGLPHFEK
NFYHESPSVRAMTESEVDDYRLRREITVEGRDVPKPVKSFHDVGFPEYVLQEIKKAGFVE
PTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPT
RELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNH
TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYN
PYKVIIGSSDLKANHAIRQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQIT
RQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDF
PGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQRVSPELAAMGRGA
PPPPSGFRDRGKGYGSSRPWS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttacgacagccgcgccgccgacccagcttcctatcgtgaccggagaagcgat
tcggggctaggagcacctccggcttcagcttcagcttcagcttctagtagaagggattac
gatgacggtggagcctccccaaggaagctcaatttggacggcttgccccatttcgagaag
aatttctaccatgaatcgccttccgttagggcaatgactgagtccgaggttgacgactac
cgtctccgcagggaaatcaccgttgaaggccgtgacgtccccaaacctgtcaagtccttt
cacgatgttggctttccagaatatgtactgcaagagattaagaaagctggctttgtcgaa
cctacgcccattcaatctcagggttggccaatggctttgaaagggcgcgatctgatcgga
attgcggaaacagggtcagggaagacgcttgcttacttgttgccagccatagttcatgta
aatgctcagccaattctagatcctggagatggaccaattgtgttagttttggccccaact
cgtgaacttgccgtccaaatacaacaggaggctactaaatttggtgcgtcgtcaaggatt
aagagtacatgcatctatggtggggttccaaaggggcctcaggtgcgtgatctccagaaa
ggcgttgagattgtaattgctactcccggaaggttaattgatatgcttgagtcaaatcat
actaacttgcggagggtcacatacctagtattggatgaagctgataggatgttggacatg
gggtttgatcctcagataaggaagattgtctcacagattcgtccagatcgtcagactctg
tactggagtgctacctggccaaaggaggttgaacaattggcaaggcagttcctttataac
ccatacaaagtaattataggttcttcagatttaaaagctaaccatgccatacgacaatat
gttgacattgttcctgaaaagcagaaatatgacaaattggtgaagctgctggaggacatc
atggacggcagccgaatactgatattcatggataccaagaagggatgtgatcagatcact
aggcagctccgcatggatggttggcccgcactatcaattcatggagataaaagtcaagca
gaaagagattgggtgctctcagagtttaaatctggaaagagtccaataatgactgcaaca
gatgtggcagctcggggtttagatgtgaaggatgtgaagtatgtgataaattatgacttc
ccgggatcacttgaagattatgtacatcgtattggtcggacagggagagctggtgcaaaa
ggaactgcatacacgtttttcacagctgctaatgccagatttgcaaaggaacttataacc
atacttgaggaagctggacaaagagtgagccctgaattggctgcaatggggcgtggtgca
cctcctccgccatcaggtttccgagaccgagggaagggttatggcagcagtcgcccgtgg
agctaa
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