Arachis ipaensis: 107615610
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Entry
107615610 CDS
T04301
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aip03036
]
107615610
03400 DNA repair and recombination proteins [BR:
aip03400
]
107615610
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
107615610
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
107615610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
TPR_DNAAF5
HEAT_GCN1_C
HEAT_GCN1
CTC1_2nd
Motif
Other DBs
NCBI-GeneID:
107615610
NCBI-ProteinID:
XP_020967572
LinkDB
All DBs
Position
B09:complement(75915712..75948099)
Genome browser
AA seq
1377 aa
AA seq
DB search
MDEPLLHVKSLREAVNALCKLEQSPQPQNAKEAQAAQKREAALKPLVDSLCCGLLRHPDK
DVRLLVAICVTEIFRVKAPEPPFEDKYLREVFKLIVNSFADLADIASPYFSKRVKLLDTV
AQLRCCVIMLEIDCVDLVLEMFNIFFSVVSDDSHDSLIYSMSSIMLNLLNESEEASQQLL
EVILRNLIKGKKDATSAAYQLAASVIKSCAEEDALNSLVCRYLISCIHARDAMVSELKES
YHEIIFKVFQCAPQMLVAVIPSLIEELLADQVDVRIKSVNLVGKLFAFSEELVAQKYHDL
FVEFLERFSDKSVDVRISALQCSKAIYVAKPYGTESDEIISAVEDRLLDFDDRVRMQAVL
VACDISRSNLKLVPSKLISQATERLRDKKISVRKRALKKMIEVYQDYCTECWKGSMTISD
HFEKIPCKIMLLCYDKDCKEFGSQNMEFVFADDLFPENLPVEERTKHWMHMFSLFSSQHE
KALLTILTQKRRLQNEMKNYLAMRKKLKGVGSEDLHKKIEDILAEMAESFPDCHKAKEGF
RSLNLTKDNKLFKSIEQLLEKQTFIVRQANQDVLLGMIGDNHPYHEFLQSIFSRCSNNIF
SSEHVQYILDFLLNNQSGNNHLEDSSVDLLLVTKVATFFYLITFFRLSLSLSLSLSLSLS
LSLSLSDLLTTDLASFIFPVMWVLVEVEDQIGEIWLMGLVFLVAKAGAHVSFNISDIYPF
LKKMCLDGTRTQAKFSVSAIAAITTEQSVFLNLYEALIDPLYSQWNVPTVLQSLGCIAQH
SVLTFETRGEEITSYITQKIIQMEHLDDGDSVTCLANTAQCCESCQLKIYGLKTLVKSYL
PYQAGHIKCNIKFLLDILSTMLYNNNFDMTETGSWENDMSRIRLAAAKAVLQLSRKWDLH
ITPEIFRCTILIGKDSSPFVRRTFLAKIHKLLKERKLPIRFTCAFAFGVTDGIEDVRYHS
YEYIAEFIKDYGLVTRKQQSSAAHGAVAHPTYMVVYLIHVLAQNSDFPLKGCRNEKLYAD
FCSPLFFVLQAFTNASIVDGDLDVVNDAVLHLFSIFRAIRKAEDAIDPQTNAKLHILAEF
GMFALNAINHGAISVSQAPGQILLPSSFYKLQGNSKCSESFCEEGFLCSLFATLKRCTPQ
AFAQKPLTKHGRKGQEAFPKSNTKISRVLDLTSSKMDNLSVRAITNAKYVRQDSPPRKRS
KHVLSSNCGSTGLHESIEKKNKIATKNCEKTSETNMLLPCDSMSGKGCQPELHLVSRRSK
RAAACTLEIVPTSCKHTVQHFKCPETHLKDSCGVKKQDILADVSNKKSFSHCDPVEHSSL
SSLKETVVTTGGLTANDKRLLNQENGNLIRSGKCKEKLASQNVTTNVCAVRRTRRRV
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacccttgctgcatgtcaaatcgcttcgagaagctgtaaatgctttgtgtaag
ttagagcagtctcctcagccgcaaaacgctaaagaagcgcaggctgctcagaaacgagaa
gctgctttgaagccgctggtggattctctttgttgtggtctgcttcgacatcctgataaa
gatgttcggcttttggttgctatttgtgtcacggaaatttttagagtcaaagcaccagaa
ccaccttttgaagacaagtatttaagggaggtttttaaactcattgttaattcgtttgcg
gatcttgctgatattgcaagcccatacttctcaaagagggttaaactattggacactgtg
gctcaattaaggtgttgtgtgataatgctggagattgactgcgtagatttggttcttgag
atgttcaatattttcttctctgttgtgagcgatgatagccatgatagtttgatttattcc
atgtcttctataatgctaaacttattgaatgagagtgaggaggcttctcagcaactgttg
gaagtgattttgcgaaatcttataaaggggaaaaaggatgcaacttctgctgcttatcaa
ctagctgcatcagtcatcaaaagttgtgcagaagaggatgcactgaactccctagtttgt
aggtatcttatatcctgtatacatgcccgagatgctatggtcagtgagcttaaagaatca
tatcatgaaatcatattcaaggtttttcaatgtgcacctcaaatgctagttgctgtcatc
ccaagcttaattgaggaattgttggctgatcaggttgatgttcggataaaatctgttaat
ttggttggcaagctttttgcattctctgaggagcttgttgcacagaagtatcacgatctt
tttgtggagtttttggaaagattttctgataaatctgtggatgtaaggattagtgctcta
cagtgttcgaaagctatttatgtggccaaaccttatgggacagaatcagatgaaattatc
tctgctgttgaagaccggttgctggactttgatgaccgagtgagaatgcaggcagttctt
gttgcctgtgatatttccaggtcaaacctgaaactcgttccatccaaactaatatctcaa
gccactgaaagacttcgggataaaaagatatccgtcagaaagagggccttgaagaagatg
attgaagtgtatcaagattactgcacggaatgttggaaaggcagcatgacaattagcgac
cactttgagaagattccatgtaaaattatgttgctttgctatgataaagattgcaaggaa
tttgggtcacagaacatggaatttgtttttgctgatgatttgtttcctgagaaccttcct
gtagaggagaggacaaagcactggatgcacatgttttcactttttagttctcaacatgaa
aaagctctgcttactattttgactcaaaagagaaggctacaaaatgaaatgaaaaattat
ctggctatgaggaagaaattgaagggagttggttctgaagacctacataagaagattgaa
gatattcttgcagaaatggctgaatccttcccggattgtcacaaggctaaagagggcttt
cgcagtttaaacttgactaaagataataagttgtttaaatcaattgaacaactattggag
aaacagactttcatagttagacaagccaaccaagatgttctgctgggaatgattggagac
aaccatccgtatcacgaatttctgcaatcaatcttctccagatgttcaaataacattttc
agctcagagcatgtccagtatatcttagattttctgttgaataaccaaagtggaaataat
cacttggaggattcttctgtggatcttcttctggtaactaaagtcgctactttcttttat
ttaattactttttttcgtctctctctctctctctctctctctctctctctctctctctct
ctctctctctctctctcagatctccttacaactgatctcgcaagttttatatttccagtt
atgtgggtattggtggaggttgaggatcaaattggtgaaatttggttaatgggtttggtt
tttttggtagcaaaggcaggagctcatgtttcatttaatattagtgatatttatccattt
cttaagaaaatgtgcttggatggaactcgcacacaggccaaattttcagtctctgcaata
gctgccataactactgagcaatcagttttcttaaatttatacgaggcgttgatcgatcct
ttgtatagccagtggaatgtcccgacagttttgcagtccctgggttgtattgcacaacac
tctgttttgacttttgaaactagaggcgaagagatcacatcatatataacacaaaagatt
attcaaatggagcacttggatgatggtgatagtgtgacatgcttagctaatactgctcaa
tgttgcgaatcttgtcaattaaagatttatggacttaaaaccctggtaaagagttattta
ccttatcaagcaggccatatcaaatgcaatattaagtttttgttggatattttgtcaaca
atgctatacaacaacaattttgatatgactgagacaggctcatgggaaaatgacatgtct
cgtatcagattagctgcagcaaaggcagttcttcagctttctaggaagtgggatttgcat
attactccagaaatttttcgctgtactattttgattggaaaggactcctcgccttttgtt
aggagaacatttcttgccaaaatccacaagttgttgaaggagcgtaaactacctattaga
ttcacgtgtgcatttgcatttggagtgacagatggcattgaggatgtccgatatcatagc
tatgaatatattgcagaatttattaaggattatggtcttgtcactcgtaaacaacaaagt
tctgctgcgcatggagcagttgcacatcctacatacatggtcgtctatttgattcatgtc
cttgctcagaatagcgactttccactgaaaggttgtcggaatgaaaaattgtatgctgac
ttttgtagtccgctcttctttgtcctgcaggcatttaccaatgccagtatagttgatggt
gacctggatgttgtaaatgatgctgtcttgcatctttttagtatttttcgggcaatcaga
aaagctgaagatgccattgatccccagaccaacgctaagctgcacattctagctgaattt
gggatgtttgctttaaatgcaattaatcatggtgcaatatcagtatcacaagctcctggg
cagattttgcttccttcctcattttataaattacagggcaattcaaaatgttcagagtca
ttttgcgaggaaggttttctatgtagtctctttgctacacttaaacgttgtacccctcag
gcatttgctcagaagccacttactaagcatggtcgcaaggggcaagaggctttccccaag
tctaataccaaaatttccagggttctagatttgacatctagcaaaatggacaatttatca
gtgagagcaataacaaatgctaaatatgtgaggcaagattcacccccacggaaaaggagt
aaacatgtgctttcttctaattgtggatcaactggtttgcatgaatcaatagagaagaaa
aacaaaattgcaaccaaaaactgtgaaaagacttcagagacaaacatgctcttgccttgt
gattctatgagtgggaagggttgtcagccagaattacatttggtatcccgaagatctaaa
agagctgctgcttgtacattagaaattgttcctacaagttgcaaacatactgttcaacat
ttcaaatgccctgaaacccacctcaaagattcctgtggtgtaaagaagcaagatatactg
gcagatgtttcaaataaaaagagtttctcccactgtgatcctgtggagcattcttctctc
agtagtctaaaggaaactgttgttacaacaggaggtctaactgccaatgacaaaaggtta
ctgaatcaggagaatggcaacctgattagaagtggaaaatgtaaggaaaaattagcatcg
caaaatgtgactaccaatgtatgtgctgtccgtagaacaagacggagagtataa
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