Arachis ipaensis: 107617274
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Entry
107617274 CDS
T04301
Name
(RefSeq) uncharacterized protein LOC107617274 isoform X1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107617274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107617274
03400 DNA repair and recombination proteins [BR:
aip03400
]
107617274
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107617274
Messenger RNA biogenesis [BR:
aip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
107617274
DNA repair and recombination proteins [BR:
aip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
107617274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
PTEN2_C2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
107617274
NCBI-ProteinID:
XP_016174493
LinkDB
All DBs
Position
B09:complement(17110398..17121868)
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AA seq
883 aa
AA seq
DB search
MDTMLSVLKQYFGFSDFRPYQKDAIQKIIEKRDCLVVMATGSGKSLCYQVPPLVVRKTGI
VVSPLISLMQDQVMALKQRGIKAEYLGSAQKDSTVQRKAEQGQFDILFMTPEKACTVPTS
FWSNLLKEGISLFAVDEAHCISEWGHDFRVEYKNLHNLRSVLLDVPFVGLTATATEKVRF
DIINSLKLKNPYVLVGSFDRSNLFYGVKPFSRGQSFVDELVQEISKVVSSGSTIIYCTTI
KDVEQISKSLAEAGIEAGMYHGQMDKKSREESHRLFVRDELQIMVATIAFGMGIDKPNIR
QVIHYGCPKSLECYYQESGRCGRDGIASVCWLYYTRSDFAKGDFYCGDLKTETQKRAVME
SLLAAERYCVLATCRRKFLLEHFGEQYPADRCGNCDNCTVSKKERDMSREAFLLMACIHS
CKGKWGLNMPVDILRGSRAKKILDAQFDKLPLHGLGKTYAPNWWKALGHQLIAHGYLKET
VSDVYRTISVSLKGEQFLASSTPDYQPSLVLSLTAELLGEEENMSTQEESKTLATSDLDG
FSEVERQLYQMLLEERLKLARSVGTAPYAICGDQTIKKITLVRPSTKARLANIDGVNQHL
VTKYGDHFLRVIQQLSQGLNLSLDGEANLLNNEVRKLSTVSVKNSSKKLTPAKFEAWKMW
HEDGLSIQMIANFPGRSAPIKEQTVAEYLLEAAQEGLPFDWSRFCEVIGLTQEIESEIQG
AILKVGSKDKLKPIKDELPENVTYQHIKTYLTMQSCGVSKDDIQTQKDSESEIQQVETHC
EANISDHSLMEKCDLEMDKVASRPVEFTTKRQKVSDMKEINSTDFKATENSILEWLKHHD
EGATLVEIQGHFNGSGEDCVVDLLNLLESDFLIYKKGGMYRVL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggacactatgctctctgttctcaagcaatattttgggttttcagattttcggccttat
cagaaagatgccattcagaaaattattgagaaaagggactgcttggtagtcatggctact
ggtagtgggaaatccttgtgttaccaggtaccacccttggttgttagaaagactgggata
gttgttagccctctaatatcattgatgcaagaccaggtaatggctttaaaacagcggggc
atcaaggctgaatatcttggaagtgctcagaaggattccactgttcagagaaaagccgag
cagggtcaatttgacattttgttcatgactccggaaaaggcttgcacagttcctaccagt
ttctggtctaacttgctgaaggaaggaattagcctttttgctgttgatgaagctcattgt
atatcagaatgggggcatgattttagggtggaatacaagaacttacacaatttacgtagt
gttctgctagatgttccttttgttggcttaactgcaactgctactgaaaaggttcgattt
gacattatcaactccctgaagttgaagaatccatatgttttggttggttcatttgatcgc
tccaatcttttctatggggtcaagccatttagccgtggacaatcttttgttgatgaactt
gtacaagaaatttcaaaagttgttagtagtggttcaactataatttactgcacaacaata
aaggacgtagagcagatatccaagtcacttgcggaagcaggaattgaggctggaatgtac
catggccaaatggataaaaaatctcgtgaagagtctcataggttatttgtcagggatgaa
ctgcaaatcatggtggctactattgcttttggcatgggcatagataagcctaacataaga
caagtgattcattatggttgccctaagagtcttgagtgctactaccaggaaagtgggcgc
tgtggtagagatggtatagcttctgtttgttggctttactacacaagaagtgactttgca
aagggtgacttttattgcggagacctaaaaacagaaacccaaaaaagagctgttatggag
tcattgctcgctgctgaacgttattgtgtgcttgcaacttgcaggagaaagttcttgctt
gaacactttggggaacaatatccagctgatagatgtggaaactgtgataactgcacagtc
tcaaagaaggagcgcgacatgtctagagaagcatttcttctaatggcttgcattcattca
tgcaagggaaaatggggtcttaatatgcccgttgatatcttgcgtgggtctcgagcgaaa
aagattctcgatgcccagtttgataagcttccccttcatggacttggaaaaacttatgca
ccaaactggtggaaagcactcgggcatcagttgatcgctcatggttatttgaaggaaact
gtcagtgatgtgtacagaactataagtgtcagtttaaaaggagaacaatttttggcctct
tctacacctgattatcaaccttccttagttttgtcactgactgctgagttgctcggagaa
gaggaaaatatgagcacacaagaagaatcaaaaactctggccacttcagatttagacggg
ttttcagaggttgagcgacagctctaccagatgcttttagaagaaagattaaagcttgca
agaagtgttggaactgctccatatgccatatgtggcgatcaaacaattaagaaaattact
cttgtaagaccatctacaaaagcaaggctagcaaacattgacggtgtgaatcagcaccta
gtaacaaaatatggagatcattttcttagagttatccagcaactgtcacaaggattaaac
ttatcattggacggggaagctaatttactaaataacgaagtaaggaaattatctacagtg
tcagtaaaaaacagttcaaagaagttgacaccagcaaagtttgaagcatggaaaatgtgg
catgaagatggtctttctattcagatgattgctaactttccaggtagatcagctcctata
aaagagcaaactgttgctgaatatctgttggaagctgcacaagaaggattaccttttgat
tggagtagattctgtgaggtgataggactgacgcaagagatcgaatctgaaattcagggt
gctattttaaaggttggatctaaagataagctgaagcctataaaagatgaattgccagaa
aatgtcacttatcagcacatcaagacttatttgacaatgcaaagctgtggtgtatccaaa
gatgacatccagactcagaaagacagcgaatcggaaatacagcaagtggaaacgcattgt
gaagccaacatttctgaccacagcttgatggaaaaatgtgacttggaaatggataaagta
gcatctagaccagtggaattcacaaccaaacgtcagaaagtcagtgacatgaaggaaata
aattcaactgacttcaaagctactgagaattctatattagagtggctaaagcaccatgat
gaaggggctactttggttgaaattcaagggcacttcaacgggtctggcgaagattgtgtg
gttgatctgctgaatttattggaaagtgactttttaatttataaaaaaggtggcatgtat
agggtcctgtaa
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