Arachis ipaensis: 107617371
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Entry
107617371 CDS
T04301
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aip
Arachis ipaensis
Pathway
aip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107617371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aip03400
]
107617371
Enzymes [BR:
aip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
107617371
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
107617371
DNA repair and recombination proteins [BR:
aip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107617371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
107617371
NCBI-ProteinID:
XP_016174617
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All DBs
Position
B09:350399..354198
Genome browser
AA seq
391 aa
AA seq
DB search
MPELPEVEAARRAVEDNCVGKKIVKCIVADDPKVIDGVSPSELQASVVGKTIVAARRKGK
NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDEEEWPSKYSKFFIELGDGLEL
SFTDKRRFARVRLLKDPTSVPPISELGPDALLEPMTLEEFTESLHKKKTEIKPLLLDQSF
ISGIGNWVADEVLYQARIHPRQTATSLSDESCAALHKSIKEVIEKALEVGADSSQFPSSW
IFHSREKKPGKAFVDGKQIDFITAGGRTTAYVPELQKPSGSQDVKEIGKSRRQTSKKKNI
DDDDEDNEKPTNGEEDDLGSLKSKKGKKAGGGGRKPSKKKSEESDYDNDGDASSDENDDN
DNVEKKKPGGKQSKKRVQSSQNSRNARRKVK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccagaagtggaggcggccaggagggccgtcgaagacaactgcgtcgga
aagaagatagtgaaatgcattgttgctgatgatccaaaagtcatcgacggtgtctctccg
tcggagctccaagcttcggtggtcggcaagaccattgtcgcagctcgaagaaagggaaag
aacatgtggcttcagctcgattcacctcctttcccttccttccaattcggcatggctggt
gctatatacataaaaggcgttgcagttactaagtacaaaaggtctgctgtaaatgacgaa
gaggagtggccttccaaatattctaagttttttattgagctaggcgatggcttggagttg
tctttcactgacaaaaggcgatttgctagagttcgcctgcttaaagatccgacatcagtg
cctcccatatctgaacttggtcctgatgcacttttggaacccatgacacttgaggagttc
actgaatctctgcacaagaagaaaactgaaatcaaacctttgttacttgatcagagcttt
atttcaggtattggaaattgggttgcagatgaagtgctataccaagcaagaatccatcct
cggcaaacagctactagcctttcggatgaaagttgtgcagctttgcacaaatccattaaa
gaggtcattgaaaaagcacttgaagttggagcagatagtagtcagtttccttctagttgg
atatttcattcacgtgaaaaaaagcctggcaaggcttttgttgatgggaaacaaattgac
tttattactgctggtggcaggaccactgcgtatgtgccagagttgcaaaagccgagtgga
tcacaagatgtgaaagaaattggaaaatctagaaggcaaacctcaaagaaaaaaaatatt
gatgatgacgatgaagataatgagaaaccaacaaatggggaagaggatgatttgggaagt
cttaaatcaaagaaggggaaaaaagcaggaggtggaggtaggaagccttccaaaaagaag
tctgaggaaagtgactatgataatgatggcgatgctagttctgatgagaatgatgataat
gataatgttgagaagaagaaaccaggagggaagcaatcaaagaaaagagttcaaagcagt
caaaatagtaggaatgctagaaggaaagttaagtag
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