Arachis ipaensis: 107617652
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Entry
107617652 CDS
T04301
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
aip
Arachis ipaensis
Pathway
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107617652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aip03041
]
107617652
Spliceosome [BR:
aip03041
]
Common components
Common spliceosomal components
SR proteins
107617652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_YTH1
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107617652
NCBI-ProteinID:
XP_016174952
LinkDB
All DBs
Position
B09:36734513..36742775
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AA seq
272 aa
AA seq
DB search
MARRSSRTIYVGNLPGDVRLREVEDLFYKFGPIVDIDLKIPPRPPGYAFVEFEDIRDAED
AIYYRDGYNFDGFRLRVELAHGGRGHTSSVDRYSSYSGSSSSRGVSRRSDYRVLVTGLPP
SASWQDLKDHMRRAGDVCFSQVFRERGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRS
YIRVREYDRRSYSRSPSRDSRRSYSRSLSRSPYVSRSRSYSQSPSYSDRSRSWSPKPKHS
RRSLSRSRSVSRSRSPYSSPRPYSRSQSPRSM
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggctagacggtctagtcgcacaatttatgttggcaatcttcctggcgatgttcgcttg
agggaagtagaggatcttttctacaagtttggtcctattgttgacattgatctgaagatt
cctccgagaccaccaggttatgcctttgtggagtttgaggatatccgtgatgctgaagat
gccatttactatagagatggttacaactttgatggttttcggttacgggttgaacttgca
cacggtggacggggtcatacatcatcagtagaccgctatagtagctatagtggtagtagc
agtagccgtggagtttccaggcgttccgattatcgtgttcttgtaacaggattaccccct
tctgcttcatggcaagacctgaaagatcatatgcgaagagctggtgatgtgtgtttttct
caagtcttccgtgagcgtggtggtatgactgggatagtggattatacaaattatgatgac
atgaaatatgctataaggaagcttgatgactcggaattcagaaatgccttttctcggtca
tacatacgggtcagagaatatgatcgccggagttattctagaagccccagtcgtgattca
aggaggagctattcgagaagcctcagccgcagtccatatgtgtcgcgaagtcgaagctat
agtcaaagccctagctatagtgacaggagcagaagttggtctccaaaaccaaagcattct
cggcgttcgttatctcgctcaagatctgtctcaagatccagatctccttattcatctcct
cgaccttacagtcgtagccaaagtccaaggagcatgtaa
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