Arachis ipaensis: 107617723
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Entry
107617723 CDS
T04301
Name
(RefSeq) pre-mRNA-processing protein 40A
KO
K12821
pre-mRNA-processing factor 40
Organism
aip
Arachis ipaensis
Pathway
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107617723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aip03041
]
107617723
Spliceosome [BR:
aip03041
]
Complex A
U1 snRNP components
U1 related factors
107617723
Complex B
107617723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
FF_RHG35_4th
WW_TCERG1
SMODS
Motif
Other DBs
NCBI-GeneID:
107617723
NCBI-ProteinID:
XP_016175051
LinkDB
All DBs
Position
B09:complement(144961093..144970995)
Genome browser
AA seq
1035 aa
AA seq
DB search
MSNNPQYPGLQPLRPPGPPIAGSLDPQRSFVPAPMPGQYRPVVPTQQPQQFMPMPSQHYP
PVGPSGPMMNVGMPPQNQQPQFPQPIQQLPPRPGQQLQLPPQPQPLPLSVARPNMHMTSE
SMMPQPDSQVPNGYAPSLGGPGMPLPASYTFGPSSYGQVQTNFSSASQFHPASQIQAPSS
SSSQSITSDTVVLSNDEKPSTTSVTPSATGIQPSLANGGSTDWIEHTSSNGVRYYYNKKT
KVSSWERPFELMTPIERVDATTNWKEYTSPNGIKYYHNKVTRESKWMIPEELKLARQQVE
KAVANGTHTDALPNSHTQPSVTPPVIETAPTAAANSSLIGQGEPSSPVSVAPVVSASTSH
PQSEMSSGPSASPHVAPITGMTVAEVELPVNTATISDAAAGSDRASVTNQNDGNNFLVKD
TLGSADEVPAEDKEDGKNDSLVEKTNDVASETKADTVSETRADLASETQANVALETKADA
SSETKTREPLPLVYANKMEAKEAFKALIESVNVGSDWTWDRTMRLIVNDKRYGALKSLGE
KKQAFNEYLSQRKKQEAEEKRMKHKKAREDFKKMLEESTELNPSTRWSKAVTIFENDERF
KAVERDRDRRDMFDSFLEELINKERAKAQEERKRNITEYRKLLESCDFIKANTQWRKVQD
RLEADERCSRLEKIDRLEIFQDYLRDLEKEEEEQKKLLKEELRKTERKNRDEFRKLMEEH
VAAGILTAKTHWRDYHMKVKDLPAYLAVASNTSGSTAKDLFEDVAEELEKQYHDEKSRIK
DAVKLAKITWSSTYTFEEFKSALSIDSPPISDFNLKLVFDELLERAKEKEEKEAKKRKRL
ADDFLHLLYSTKDITASSKWEDCITLIEDSQEFRSVGDDNRCKEIFEEYITQLKEQAKEG
ERKRKEERAKKEKDREEKERRKSKQRREKEGVREREKDKADSDSADLTEKGDSKNKRRQH
QSPEHTSHELDKERSKKSHGHSSSDRKKSKRHSSGHESDEGRHKRHKRDHRGDPHREGGY
AEAEDDDYGKDVDRW
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataatccgcaatatccgggtttacagcctcttcggcctcctggacctcccatt
gctggttcactggatcctcagcgcagttttgttccagctcccatgcctggtcaatatcgc
cctgtagttcctactcagcagcctcaacagttcatgcccatgccatctcaacattaccct
cctgttggtcccagtggtcccatgatgaatgttggaatgcctcctcaaaatcaacagccc
caatttcctcaacccattcaacagttacctccaagacctggccaacaattgcaactccca
ccacagccgcagccacttccattgtcagttgctcggccaaacatgcacatgacatctgaa
tcaatgatgccgcagcctgattctcaagtgccaaatggctatgcaccaagcttaggtggc
ccgggaatgccccttccagcatcatatacgtttggaccatcttcttatggtcaagtgcaa
actaattttagctctgctagccaattccaccctgcttctcaaatccaagctccctctagt
tcttcttcccagagcattacctctgatacagttgttctgagcaatgacgagaaaccttca
actacatctgtcacgccttcagcaactggcatccagccttcacttgcgaatggtggatcc
acagattggattgagcatacttcttctaatggagtaagatattactacaataagaagact
aaagtatctagctgggagaggcctttcgaattgatgaccccaattgagagggtggatgca
acaacaaactggaaggagtatactagtcctaatggaataaagtattaccacaacaaggtc
actagggaatcaaagtggatgattcctgaggaactgaagttggcccgtcagcaagttgaa
aaggcagttgccaatggaacacatactgatgctctaccgaattctcatactcaaccgtct
gtaactcctcctgtgattgaaacagcaccaactgcagcagctaattcatctttgattggt
caaggggaaccatcaagtcctgtttcagttgctcctgttgttagtgcatctacaagtcat
ccacaatctgagatgagttctggaccatctgcctctcctcatgtggctcccataactgga
atgacagtggctgaagtagagttaccagtaaatactgctacaatatctgatgctgcagca
ggaagtgatagagcttctgttaccaatcagaatgatggcaacaactttctggtgaaggat
acactgggctctgcagatgaagttccagcagaagataaagaagatggtaaaaatgattcg
ttagtagaaaaaacaaatgatgtggcttcagaaacaaaggcagatacggtttcagaaaca
agggctgatttggcttcagaaacacaggcaaatgtggctttggaaacaaaggcagatgca
tcttcagaaacaaaaacacgtgaaccattacccttagtttatgcaaataagatggaggct
aaagaagcattcaaagcactgatagagtctgtaaatgttggatctgactggacatgggat
cgaactatgcgattaatagttaatgacaaaaggtacggtgcattaaaatcgcttggagaa
aagaagcaagctttcaatgagtacttaagtcagaggaaaaaacaggaagcagaagaaaag
cgcatgaagcataaaaaagcacgagaggattttaaaaagatgttagaagagtccacggag
ttgaatccatccactagatggagcaaagccgtgacaatatttgaaaatgatgaacgtttc
aaggctgttgagcgtgacagagatcgcagggatatgtttgatagtttcttggaggaactt
ataaacaaggaacgagcaaaggctcaagaagaacggaagaggaatataacagagtacagg
aagcttttagaatcttgtgactttataaaagctaacacacagtggcgaaaagttcaagac
cgcttagaggctgacgaaagatgttcgcgtcttgagaaaattgaccgtttggaaatattc
caggactatttacgtgatttagagaaggaagaggaagagcagaagaagttactaaaggag
gaattgagaaagacagaacgtaaaaaccgtgatgaattccgcaaattgatggaagagcat
gttgctgctggcattcttacagcaaaaactcattggcgtgattatcacatgaaggtgaaa
gatttacctgcatatctagcagtggcatcaaacacatcaggctcaactgcaaaagactta
tttgaagatgttgctgaagagctagagaaacaatatcatgatgaaaagagtcgaattaag
gatgcggtgaagttggctaagataacatggtcatcaacctatacttttgaagagttcaaa
tcagctttatctattgactctcctccaatatctgattttaacttaaagctagtgtttgat
gagctactagagcgggctaaggagaaggaagaaaaggaggccaaaaaacggaaacgtcta
gcagatgatttccttcatttactatattctactaaggacattactgcatcttcaaaatgg
gaagattgtataacacttattgaagatagtcaagagttcagatctgttggagatgataac
cgttgcaaggaaatatttgaggagtacattacacaactgaaagaacaggcaaaagagggt
gagcggaaacggaaagaggagagggcaaagaaggaaaaggatagggaggaaaaagaaaga
cgaaaatctaagcaaagaagggaaaaagaaggagttcgcgaaagagagaaagataaagca
gacagtgacagtgccgacttaacggagaaaggcgatagtaaaaacaaacggaggcagcat
caaagtcctgagcacacttctcatgaattggataaagagaggagtaagaaatctcatggg
catagtagcagcgacaggaagaaatcgaaacgacattcatctggtcatgaatcagatgaa
ggccggcataaaagacacaagcgcgaccaccgcggtgatcctcacagagaaggtggttat
gcggaggcggaagacgatgactatggtaaagatgttgatagatggtaa
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integrated database retrieval system
