Arachis ipaensis: 107617886
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Entry
107617886 CDS
T04301
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107617886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107617886
03012 Translation factors [BR:
aip03012
]
107617886
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107617886
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107617886
Translation factors [BR:
aip03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107617886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
Dicer_dimer
AAA_11
ATPase
ATPase_2
NPHP3_N
ABC_tran
AAA_23
TsaE
Motif
Other DBs
NCBI-GeneID:
107617886
NCBI-ProteinID:
XP_016175249
LinkDB
All DBs
Position
B09:complement(144064978..144074615)
Genome browser
AA seq
1200 aa
AA seq
DB search
MPFIILSSSHPSLLTAKALKPSIHAMKDRPTLSSYGAIYVPPHHRLRSVITSANYNSSAP
SVAKLRDHHGAALNPRPVASAAPTTVHRSQTTLPEQIPVKGNSRFVSAYDDVVSEEGSDR
EFEAPSFRSASPNDNVDEWMRKLTLLLNDKSKQELLSREKKDRRDFDQIALLASRMGLYS
HMYAKVVVFSKVPLPNYRYDLDDRRPQREVSMPITLLRRVDAYFEEHLTRKSKMKESFSD
VSFTRSSSNSSIGTDEGLFEHPEPLASSKAVGEKILRRRSLQMHDQQQAWQESPEGRRML
EFRRSLPAYKEKKAILSLLSRNQVVVISGETGCGKTTQIPQFILESEIESVRGAACNIIC
TQPRRISAMSVSERVAYERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRN
LTGVTHVIVDEIHERGMNEDFLLIVLKDLLPHRPEMKLILMSATLDSELFSSYFNGAPVM
NIPGFTYPVRTHFLEDILEMTGYRLTTSNQIDDYGQERMWKMNKQVPRKRKSQIAYVVED
AIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCMICENERPGAVLVFMTGWDDISTL
KEKFLAHPVLGDPNRVLLLTCHGSMGSSEQRLIFEEPKDGVRKIVLATNIAETSITINDV
VFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRRGRAGRVQPGVCYHIYPRCVYDAF
AEYQLPEILRTPLQSLCLQIKSLRLGSIPEFLSRALQSPEILAVQNAIEYLKIIGALDEN
ENLTTLGSYLTMLPMEPKLGKMLILGAIFNCLDPILTVAAGLSVRDPFLTPLDKKDLAEA
AKSQFAGAYSDHLALIKAYEGWKDAELDIGGCEYCWKNFLSAQSMKAIDALRREFRCLLK
DIGLVDSNTANCNLWSCDVNLIRAVICYGLYPGICAVVHNEKSFSLKTMEDGQVLLYSNS
VNARETRIPYPWLLFNEKIKVNSVFLRDSTAVPDAVVLLFGGNLLKGDADGHLKMLGGYL
EFFMEPPVADLYQCVKRELDDLIQRKLLFPKMSIHLYDELLSAVRLLISIDTCEGKFVFG
RRVFKPAKSTVMATSHPASISRTESGPGGDNSKSQLQTLLTRAGYAAPSYKTKQLKNNQF
RATVEFNGMQIMGQPCSNKKSAEKDAAAEALQWLMGGKQSGSEYISHMSKLLKKSKKDHN
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcattattctctcttcttcacacccttctttgttgaccgccaaagccctaaaa
ccttcgattcacgccatgaaggaccgccctacgctgtcctcttatggcgccatttacgtt
cccccgcaccaccgcctccgctccgtcatcacttccgccaattacaactcctccgctccc
tctgtagccaagctccgggatcaccatggcgcagctctaaaccctagacccgttgcttca
gctgctcctaccactgtgcatcgctcgcaaacgacgttgccggagcaaattcctgtcaag
gggaattcgcgctttgtttcagcttacgacgacgtggtttccgaggaaggctccgatcgt
gaattcgaggctccctcatttcggagtgcttcaccaaatgataacgttgatgagtggatg
aggaagctaacattgctcttaaacgacaagagtaagcaagagttgttgtccagggagaaa
aaggataggcgtgattttgatcaaattgcgcttttggcaagcagaatggggctgtatagc
cacatgtatgcaaaggttgttgtcttcagtaaggttccacttccaaactatagatatgac
ttggacgataggcggccgcagagggaggtgagcatgcctataaccttgttaaggcgagtt
gatgcatactttgaggaacaccttacccgaaagtccaagatgaaggaaagcttttcagat
gtatcatttacaagatcaagcagtaacagtagtattggtacagatgaagggctttttgag
caccctgagccacttgcatctagtaaggctgttggggagaaaatacttaggcggaggagc
ttgcaaatgcatgatcagcagcaagcatggcaggaatctccagaaggaagaagaatgcta
gaatttcgcaggagtctccctgcttataaagagaaaaaagcaatattgtctctcttatca
agaaatcaggtagttgtcatctcaggcgaaacaggttgtggcaagacaactcaaattcca
cagtttattttagaatctgagatagaatcagttcgaggagctgcttgtaatatcatatgc
acacaaccaagacgcatatcagctatgtctgtttctgaaagggttgcctacgagagaggg
gagaaattgggtgaatctgttggatataaagttcgattggagggtatgaaggggagagat
acccatcttctcttttgcaccacgggcatcttattaagaagattgctagctgatagaaac
ttaacaggtgtaactcatgttatcgtggatgaaattcatgagcgtgggatgaatgaagat
tttctgcttatcgtccttaaagatctccttcctcaccgacctgaaatgaaactgattttg
atgagtgctaccctagattcagagctcttctcttcttactttaatggggcaccagttatg
aatattccgggcttcacatatcccgttagaactcattttttggaggacattcttgaaatg
acgggctacagattgacaacttctaatcaaattgatgattatggtcaagaaaggatgtgg
aaaatgaacaaacaggtcccaagaaagaggaaaagccaaattgcttatgttgtcgaggat
gctattagagctgctgatttcaaagattacagcccacagacacaggagtctttgtcgtgt
tggaatcctgattgtattggatttagtctcatagaatatatcctatgcatgatatgtgag
aatgaaaggcctggtgctgttttagtttttatgactggatgggatgatataagcactttg
aaagagaagtttttggctcatcctgtcttaggagatccaaatcgagttttgttgcttacc
tgtcatggctcaatgggcagttcagaacagaggttaatatttgaagaacccaaagatgga
gtaagaaaaatagtgcttgcaacaaatatcgctgaaacgagtatcacaataaatgacgtt
gtttttgtgcttgactgcggaaaagcaaaagaaacatcatatgatgcactgaataacacg
ccctgtttgcttccaacatggatctctaaggtttctgcccaacagagacgaggaagagct
ggtcgtgttcaacctggagtgtgttaccatatctatcctagatgtgtatatgatgcattt
gctgagtatcaattgccagaaattttgaggacacccttgcaatctctgtgtctgcaaata
aaaagtctaagacttggaagcatacctgagttcttgtctagggctttgcagtctccggag
atccttgcggtacaaaatgctattgagtatttgaaaataattggggctttggatgagaat
gagaatttgactactctagggtcctatctgacaatgcttcctatggaacccaaacttggc
aagatgcttatattaggggctatcttcaattgcctggatccaatattaactgtggctgct
ggccttagtgtgagagatcctttcctaacaccactggacaaaaaagatcttgcagaggca
gcaaaatctcagtttgctggagcatatagtgaccaccttgcacttataaaggcttacgag
ggttggaaagatgcagaattagacattggaggatgtgaatattgctggaaaaattttctt
tcagcacaatcaatgaaagctattgatgctcttaggagagagttcagatgcctgctcaag
gatattggattagttgatagcaatacagccaactgcaacttgtggagctgtgatgtgaat
ctcatccgggcagttatttgctatggtctatatcctggaatttgcgctgttgtgcacaat
gaaaagtcattctctttgaaaacaatggaggatggtcaagtgctcctatattcgaactcc
gtcaatgctcgggaaactagaattccatatccatggttactttttaatgagaagataaaa
gtgaactctgttttcctccgcgactccacagctgtgcctgatgcagtggtgcttctgttt
ggtgggaacttattgaaaggggatgctgatggccacttaaaaatgttgggaggatatctg
gagttcttcatggaacctcctgttgctgatctgtaccagtgtgtaaagagagaacttgat
gacttaattcaaagaaaactactttttccaaagatgagcatacacttgtatgatgaactc
ctatcagcagtgcggttgctgatttccatagacacatgtgaaggcaaatttgtatttggt
cgtcgggtctttaaaccagcaaagtcaacagtgatggccacatcacatccagcatcgatt
tcaaggactgagagtggccctgggggtgataattctaaaagtcagctccagaccttactc
acaagagcaggatatgctgcacccagctacaagactaaacaattgaagaataatcagttt
cgggctacagttgagttcaatggaatgcagataatgggccaaccctgtagcaataagaaa
agtgcagaaaaagatgctgcagctgaggccttgcagtggctgatgggtggaaaacagtcg
ggcagtgagtatatcagtcacatgtccaagttgctgaagaaaagtaagaaggatcacaac
tga
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