Arachis ipaensis: 107618018
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Entry
107618018 CDS
T04301
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
aip
Arachis ipaensis
Pathway
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107618018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aip03041
]
107618018
Spliceosome [BR:
aip03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107618018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
107618018
NCBI-ProteinID:
XP_016175427
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All DBs
Position
B09:140821655..140826023
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AA seq
834 aa
AA seq
DB search
MDDREKSSKRTRDRHSDRDHKRHRESSDEHRHHHHHHRSDRNSKHDRKSRERDEDDREGT
RAYDRDEREGSRGRSKPRDDEREREDSAEPRHSSHSHSHKRKEREQSQEDRDDKRVRVSE
ESKELKRERRRFGDKAIKEDGQEAKIDKAAIEDKKQVLDNEVKLKHEELTDNNNKQIDGN
GNASLNNGSALGSPAVAPTSAPEASWGPTSFPTKVSSNSTTNENKGVSITRSHEVTGKSS
TDGSSSTAGKSGSLSIDALAKAKKALQMQKELAEKLKKIPQLNKSSPQNSYGSTKPDESA
IPSVSAGVASKPSMSSPSGPAVNVPVLSSGASGSTAAGIPTPTPANYEAVRRAQELAARM
GFRQDPQFAPLINMFPGQVVADIAVPQKPTKAPVLRLDAQGREIDEHGNVVNVTKPSNLS
TLKVNINKQKKDSFEILKPVLDVDPDSNPHFDPSMGINKNKFLRVKRQFQFVEEGKWSKD
AEIIKLKSKFGEAQAKEQKAKLAQLAKAKAAPDINPNLIEITERVVIKEKPREQIPEIEW
WDVPLLQSGNYGDSADGTIGEDKLKMEKITFYVEHPRPIEPPAEPAPPPPQPLKLTKKEQ
KKLRTQRRLAKEKERQEMIRQGVIEPPKSKVKISNLMKVLGSEATQDPTRLEKEIRSAAA
EREQAHIDRNIARKLTPAELREKKEKKLFDDPNTVETLVSLYKINDLSHPKARFRVDVNA
QENRLSGCAVISDGITVVVVEGGCKSIKRYGKLMLRRINWSEFSKETEENEDSDDDKPVN
KCSLVWQGSVAKPSFNRFTVHDCITEAAARKVFVDAGVPHYWDLAVNYVEDEAV
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagagaaaaatcatccaagagaaccagagatcgtcactccgatcgcgaccac
aaacgccaccgtgaatcctccgatgagcaccgccaccatcaccaccaccaccgatccgac
aggaattccaagcacgatcgcaaatccagggagagggatgaagatgaccgagaaggaacc
agagcttatgacagagacgagagagaaggcagcagaggaaggtcgaagcctcgcgatgac
gagagggagagagaggattcggcggagccacgacactcttcgcattcgcactcgcataag
cggaaagagagggagcagagccaggaagatagggatgataagagggttagggtttccgag
gagtccaaggaactgaaaagagaaaggagaaggtttggggataaagccataaaggaagac
ggacaagaagcgaaaattgataaagctgccattgaagataagaaacaagttctcgataat
gaggtcaagttgaagcacgaggagctcactgataacaataataagcagattgatggaaac
gggaacgcttctctgaataatggttctgccttgggatcacctgctgtggcaccgacgagt
gctcctgaggcatcttggggccctacttcttttcctactaaggtatcttcaaattctacc
acaaatgaaaataagggagttagtattaccaggtctcatgaggttactggaaaatctagt
acagatgggtcatcttcaactgctgggaaaagtggaagcctgtctattgatgccttagct
aaggctaagaaagctttacagatgcagaaagagttggctgagaagctgaagaagattcct
cagttgaacaagagttctccacagaactcatacggaagcacaaaacctgatgaatctgcc
attccctctgttagtgccggagtggcatcaaaaccttctatgtcatctccatctggacct
gcagtaaatgtaccggttctttcttcgggagctagtggctcgactgccgctggtattcca
actccaactccagccaactatgaagctgtcaggcgtgctcaggagcttgctgctagaatg
ggatttaggcaagatccacagtttgctcctcttataaacatgtttccaggtcaagtggta
gcagatattgccgttccacagaaacccaccaaagcccctgttcttcgtcttgatgctcag
ggaagggaaattgatgaacatggaaatgttgttaatgtaactaagccaagtaaccttagc
acattaaaggtcaacattaacaaacagaagaaagattcatttgaaatactaaagcctgtt
ttagatgtcgatcctgatagtaatccccattttgatccaagtatgggtataaataaaaac
aagttcttgagggtcaagagacaatttcagtttgtggaggaaggaaaatggtcaaaagat
gctgaaataataaaattaaagagcaaatttggggaagctcaagcaaaagagcagaaggcc
aagctagcacaattggcaaaggcaaaggctgctcctgatataaacccgaacttaatagaa
ataacagagagggttgtaattaaagagaaacccagggaacaaattccagaaattgagtgg
tgggatgtacctcttctgcaatctggaaattatggtgacagtgctgatggaaccatagga
gaagacaaactgaaaatggagaaaatcactttttatgtggagcatcctcgtcctattgaa
ccacctgctgagcctgcacctccaccacctcaacccctcaaactaaccaagaaggaacag
aagaaactcaggacacagcggcgattggccaaggagaaagagaggcaggagatgataaga
caaggtgtaatagaacctccaaaatcaaaggtcaagattagcaatttgatgaaagtactt
ggctctgaagcaacacaagatcctactcggcttgaaaaggaaatacgaagtgcagctgct
gaacgtgagcaggctcatatagataggaatattgcacgcaagcttactcctgctgagctg
cgggagaagaaggagaagaagctgtttgatgaccctaatacagtggaaacactggtctca
ctttacaagattaatgacctatcacatccaaaggcccgctttagagttgatgtcaatgct
caggagaatcgtttgagtggatgtgctgtgattagcgatggtattacggtagttgtggtt
gaaggtggatgcaagtcgatcaagaggtatgggaaacttatgctgaggcgtataaattgg
agcgaattttcaaaagagaccgaggaaaatgaagattcggatgacgataaaccagtgaat
aagtgttctctagtatggcaaggaagtgtcgccaaaccgagcttcaacaggttcactgtc
catgactgcatcaccgaagcagctgctcgcaaagtttttgtggatgctggtgttccccat
tattgggacctagctgtcaactatgtagaagatgaagctgtttga
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