Arachis ipaensis: 107618421
Help
Entry
107618421 CDS
T04301
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aip
Arachis ipaensis
Pathway
aip00040
Pentose and glucuronate interconversions
aip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107618421
Enzymes [BR:
aip01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107618421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107618421
NCBI-ProteinID:
XP_016175965
LinkDB
All DBs
Position
B09:142816078..142820847
Genome browser
AA seq
498 aa
AA seq
DB search
MILHISSILLMWLLLSSFSPPIKATFNLTLPHQHPYPEAVVHQVQRKINASLSRREVLSK
DQSSACLTGNPVDDCWRCDPNWSANRQKLADCGIGFGRDAMGGKGGQIYVVTDSSDRDPA
NPVPGTLRHAVIQDVPLWIVFSGDMTIVLKHELIFNSYKTVDGRGANVHVTGHGCITLQY
ISNVIIHNIHVHHCKPSGNTNIRASPTHVGWRGVSDGDGISIFGSRKIWIDHCSLSYCTD
GLIDAIMGSTGITISNNHFAHHDEVMLLGHNDKYLPDKGMQVTIAFNHFGEGLVQRMPRC
RLGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYTAPADPNAKEVTKRVDTNEGEWSDW
NWRTDGDIMVNGAFFVPSGGGMSAQYAEASSVQPKSAVQIDHLTMYSGVFGDPRDNGDLF
PGYTGGGTVTSATNKGGSSGGSSGGDGGDFFGMIFGGGSSQAAPPPSSILVFVSTFLSLL
IIFILDTTTNHAILLSLL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgattcttcatatcagctccattctgttaatgtggcttctgctaagttcattctctcct
ccaatcaaagctaccttcaacctcaccttgccccaccaacacccttaccctgaagctgtg
gttcatcaagttcaaaggaaaatcaatgcttcactttcaagaagggaggttctctcgaaa
gaccaatcctccgcctgtctcaccggaaaccccgtcgacgactgttggcggtgcgaccca
aactggtcagcaaaccggcagaagctcgccgactgtggcatcggctttggacgcgacgca
atgggcggaaaaggcggccagatctacgtagtaaccgactcctccgacagagacccggcg
aaccccgttcccggaaccctccgtcacgcggtgatccaagacgtgccactctggatcgtt
ttctccggcgacatgaccatagtcctaaaacacgaactaatcttcaacagctacaagacg
gtggacggtcgcggcgccaacgtgcacgtcaccggccacggctgcatcacgctccaatac
atctcgaacgtgatcatccacaacatccacgtccaccattgcaagccctccggcaacacc
aacataagagcctctccgacgcacgtggggtggaggggagtctccgatggcgacggaatc
tccatcttcgggtcacgcaagatctggatcgaccattgctctctctcgtactgtacggac
ggattaatcgatgccataatggggtcgacggggatcacaatttcaaacaaccatttcgcg
caccacgacgaggtgatgctgttggggcataacgacaagtacttgccggataaaggaatg
caggtcaccatcgctttcaaccacttcggtgaaggtttggttcagagaatgccacggtgc
agattgggatatattcatgttgttaacaatgatttcactcagtgggagatgtatgcaatc
ggaggcagcgctaaccccaccattaacagccagggtaaccgttacactgctcccgccgat
cctaacgccaaggaggtgacgaagcgcgtggacacgaatgagggggaatggagcgattgg
aattggaggacggacggggacataatggtaaatggagcattctttgtgccatctggtggt
ggcatgagtgctcagtatgcagaggcatcaagcgtgcaacccaaatccgccgtgcaaatc
gaccatcttaccatgtattccggcgtgttcggtgatccaagggacaatggggacttattt
cccggttacaccggaggtgggaccgtgacgagcgccaccaacaagggtggaagcagtggt
gggtccagcggtggcgatggtggggacttcttcgggatgatattcggcggtggtagcagc
caagcagcaccaccaccctcatcaattcttgtatttgtttcaacatttttgtccctttta
attattttcattttggacactaccaccaaccatgctattttattatcattattatga
DBGET
integrated database retrieval system
