Arachis ipaensis: 107618899
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Entry
107618899 CDS
T04301
Name
(RefSeq) polyadenylation and cleavage factor homolog 4
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
aip
Arachis ipaensis
Pathway
aip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107618899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107618899
03019 Messenger RNA biogenesis [BR:
aip03019
]
107618899
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107618899
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
107618899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Ribonuc_2-5A
VHS
Motif
Other DBs
NCBI-GeneID:
107618899
NCBI-ProteinID:
XP_016176562
LinkDB
All DBs
Position
B09:complement(5283658..5286339)
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AA seq
322 aa
AA seq
DB search
MYSENLIVSAENPRPFAFQQHLSSSSSTTNSANAKPMSNEIAQMPPPSTLGCRFNAMLKL
RDDELRATAAHVPPPSTEEIVQLYEMLLSELTSNQKLIINDLTFIAVHQREHARGIADAI
CARILKVPAEQKLPSLYLLDSIVKNFGQEYVRYFALRLPEVFCEAYRQVQPHLHPAMRHL
FGTWSEVFPPSALRKIEAELQLSQVVNNSQSSNMNPLRASESPSPSHGIHVNPKYLQQLE
RSTVDSTSGKKWCGLFVGDDCVQEELLEKAVPGDDDGERKMNFAWRVDKMEADIRNLKFM
TQVLGFGLLVVVVFVGMVLLKR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtactctgaaaatctgatagtgtccgctgaaaaccctagacccttcgcgtttcagcaa
catctgtcttcttcttcgtctactactaattcggccaacgcgaaacccatgagcaatgag
atcgcacagatgcctcccccttccactctcggttgcaggttcaatgctatgctcaagctg
cgcgacgacgagctcagggccaccgccgctcacgtgccccctccgtctacggaagaaatc
gttcagctgtacgagatgctgctgtcagagctcacgtccaatcagaagctcattatcaac
gatctcaccttcatcgctgtgcaccagagggagcatgccaggggcatcgccgacgctatc
tgcgctcggattctcaaggtgcctgcagagcaaaagcttccttcactctatcttttggac
agtatagtgaagaactttggacaggaatatgttagatactttgcattacgcctgcccgaa
gttttctgtgaggcatacaggcaggttcagcctcatttgcaccctgctatgcgccatctc
tttggcacctggtcagaagtctttccaccgtctgccttacgcaagattgaagctgagttg
caactttctcaagtagttaataatagtcaatcgtccaacatgaatcccctcagagcatct
gaatctcctagtccaagtcatggcatacatgtaaatccaaagtacctgcagcagttggag
cgctcaactgtggatagtacaagtgggaaaaaatggtgtggcttattcgtcggggatgat
tgtgtgcaagaggagctgcttgaaaaagctgttccaggagatgatgatggtgaaaggaaa
atgaactttgcatggcgggtggacaagatggaagcagacattagaaatctgaaattcatg
actcaagttcttgggtttgggttgttggtagttgtagtttttgtaggaatggtgctctta
aagcgttga
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integrated database retrieval system
