Arachis ipaensis: 107620073
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Entry
107620073 CDS
T04301
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52B-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107620073
03041 Spliceosome [BR:
aip03041
]
107620073
03036 Chromosome and associated proteins [BR:
aip03036
]
107620073
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107620073
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107620073
mRNA cycle factors
Common to processing body (P body) and stress granule
107620073
Spliceosome [BR:
aip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107620073
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107620073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RVT_2
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107620073
NCBI-ProteinID:
XP_016177780
LinkDB
All DBs
Position
B10:8949917..8955586
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AA seq
681 aa
AA seq
DB search
MTTLRVLLFVAVPKRWFLQQLDVNTAFLHGDLLEEVYMRVPQGLATPPGFTAILAYVDDL
VLAGDDANEIEHIKSVLDARFSIKDLEKLKYLLRMEVTYNTKGLALYQKKYTTDLLEKFG
LLEHFFWPRATWHFNHLDLNAEDDTTSGAGGGINFEAYESVPVEVSGDEVPLPVESFVET
DFHQVLKTNIERCKYVKPTPIQRHAIPIACAGRDLMACAQTGSGKTAAFCFPIISVILKN
RRPGFTSVVRDRGGTVSYPTSLILSPTRELSCQIHDEAKKFAHQTGVKVVVAYGGAAITQ
QLRNLEKGVDILVATPGRLVDIIERGRVSLTRIKLLALDEADRMLDMGFEQQIRKIVEQM
DMPPPGVRQTMLFSATFPDDIQKLASDFLSNYIFLSVGRVGSSTELIVQKVEYVEDNEKI
NHLMDLLHGQNARGANGKPALTLVFVETKRGADNLESTLTRKGFRAIAIHGDKVQMERER
ALRSFKKGATPIMVATDVASRGLDIPHVAHVINYDLPRNIDDYVHRIGRTGRAGKSGFAT
AFFSYKNNHLAKPLVDLLQEAKQEIPSWLSQYAGESSSYDGTGGSHPSQQYGGRDFRNVT
EPEVENYDNHSTTFGDSYNADYTFDIKDSNEYADSSSYEMANSVPPATSCHYTYANTDLY
GGGNVEDGPGGYASIVATGWD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgactacattaagagttctcttgtttgtagctgtcccgaagcgatggtttctccaacaa
ttggacgtaaacactgcttttcttcacggtgacttactcgaagaggtatacatgcgggtt
cctcaaggactagcaacacctccaggtttcactgcaattttggcatatgtggatgatctt
gttttggcgggggatgatgccaatgagattgaacacatcaaatcagttctggatgccaga
ttcagcatcaaagatttagaaaaactcaaatacttattgagaatggaggttacttataac
acaaagggattggcattgtatcaaaagaagtatacaacagatctcttagagaaatttggg
ctattggagcacttcttctggccccgcgccacgtggcacttcaaccaccttgacctgaac
gctgaagacgacaccacctccggcgccggcgggggaatcaacttcgaggcgtacgaatct
gtaccggtggaggttagcggcgacgaagttcccctgccggtggaatcgttcgtggaaacc
gatttccaccaagtgctgaagacgaacatcgagcggtgcaagtacgtgaagcctacgccg
attcagcgccacgccattcccattgcttgcgccggccgtgacttgatggcctgcgcgcag
actgggtccggtaaaacggcggcgttttgcttcccgatcatttctgttattcttaagaat
cgtcgtccggggtttacttctgtggttcgtgatcgtggcggcactgtttcatatccaacg
tcacttattctttctcctactagagaattatcttgccaaatacatgatgaagcgaagaag
tttgctcatcaaactggagtgaaggttgttgttgcttatggtggagctgcaataactcag
cagctgcggaatttagagaagggtgttgatatacttgttgctactcctgggaggttggtg
gatatcattgaaagagggagggtttctttgacaaggataaagcttcttgctttggatgag
gctgatcgaatgttggacatggggtttgagcagcagatacgcaagattgttgagcagatg
gacatgcctccacctggtgttaggcaaactatgcttttcagcgctacattccctgatgat
attcagaagcttgcatctgactttctatcaaactacatattcctatctgttggaagggtt
ggttctagcactgaattgattgtgcagaaagttgaatatgttgaggataatgaaaagatt
aaccatctaatggatctactccatggtcaaaatgcacgtggcgccaacgggaagcctgct
ttgactcttgtatttgttgaaacaaagaggggagcggataatttagaatctaccttgacg
agaaaagggtttcgtgctattgcaatacatggtgacaaagttcaaatggaaagggaacga
gctttaagatccttcaaaaaaggtgcgactcctatcatggtggcgacagatgttgcttcc
agaggtttggatatcccgcatgtggcccatgtcatcaattatgatttgccaagaaacatt
gatgactatgttcacagaattggcagaactggccgtgctggcaaatctggttttgccact
gccttcttcagctacaagaacaatcatcttgcaaagcctcttgttgaccttttgcaggaa
gcaaagcaagaaattccttcttggctgagccaatatgctggtgagtcttcatcatatgat
ggcactggtggtagccatccatctcagcagtatggtggtcgtgacttccgaaatgttact
gaacctgaagtggagaattatgacaaccactccactacttttggcgattcatataatgct
gattatacatttgacataaaagactccaatgaatatgctgattcatcatcttatgagatg
gcaaattcagttcctcctgctaccagttgtcattatacttatgccaatactgacttgtat
ggaggtggcaacgttgaagatggtcctggaggttatgcatcgattgttgcaactggatgg
gactag
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