Arachis ipaensis: 107620312
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Entry
107620312 CDS
T04301
Name
(RefSeq) uncharacterized protein LOC107620312
KO
K14315
nucleoporin NDC1
Organism
aip
Arachis ipaensis
Pathway
aip03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107620312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107620312
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107620312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
107620312
NCBI-ProteinID:
XP_016177977
LinkDB
All DBs
Position
B10:complement(20341339..20346378)
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AA seq
490 aa
AA seq
DB search
MSMSMSMSSPEVLLKNRFMSFLIWQSIPSTLIFLLFKPILSSSFWPLFTSSLSFPDSAHF
RARAKVSLSFVLFAAASAASGLVAAVSLCGLRAIGEGFWVIGRVGLRGFFVGLLFGLHYV
LKHRWVLEFPIIQRPPYFSFKMGVPSAGRRALKLSIVASVFSAILLELLPHPFKYSISLQ
RYFTEQIVFSIATFAIFFCWELTHHLHRVLHTKRSIFAPPXXXXAAETNPTEHLLLALEE
SDPTSLLRYLAYFDLCMVCEKNVDTWRRAAFFEETGETYKRVIAVCLKPLEQLATILSEG
MGNSVDKPAQLSNQLSSPTDPRLDSKCLEQLQLLQLYTWCSRSVASLTACSRKEDKFGVA
QLSGSNAAVISTLISCLLAVENFMGKKTNLQSPHQLLGPAGIRWATMNGGRVDVSSGKRR
SGPVNSKAYVIADVLRTSIYEIVSAFHDEMLAGAKASLLEKDWITNGKPAFGTREMLIQK
LRLFLDYRAT
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtcaatgtcaatgtcgtctccggaggtgttactgaagaatcgtttcatgagc
ttcttgatctggcaatccataccctcaaccctcatcttcctcctattcaaacccatcctc
tcttcttctttctggccactcttcacttcctctctctccttccccgactccgcccacttt
cgcgcccgtgccaaggtttccttatcattcgtgctcttcgcggccgcctctgcagcttct
ggtctggtggcggcagtgtccctatgcgggcttcgagccattggtgagggcttttgggtg
attggaagggtagggttgaggggtttcttcgttggtttactttttggtttgcattacgtt
ttgaagcatcgatgggttttggagtttcccatcattcagcggccaccttacttcagcttc
aaaatgggagttccttcggctggtaggcgcgctctcaagctttccattgtggcttccgtc
ttctcagctattttattagagcttctcccacatccatttaagtacagcatttcactacag
agatacttcactgagcagatcgtcttttctattgccacttttgctatcttcttctgttgg
gaattgactcatcacttgcaccgggttttacatacaaagagatccatatttgcacctccn
nnnnnnnnnncagcagcagaaacaaatccaactgaacatctccttttagctttggaggag
agtgatccaacatctcttctacgctatcttgcgtattttgatctctgtatggtatgcgag
aaaaatgttgacacttggaggcgtgcagcattttttgaagaaactggtgagacttacaaa
agagtaatcgctgtgtgcttgaagccactggagcaacttgccacaatattaagtgaaggc
atgggaaattctgttgacaaacctgcacagctatcgaatcagttatcatctccaactgat
ccacgacttgattcaaagtgcttagaacaattgcagcttctccagctttacacgtggtgt
tcaaggtctgttgcctcactgactgcctgttcacgcaaagaagataagtttggggttgct
cagctctctgggagtaatgctgccgtaatttcaacgttgatatcctgtcttctagctgtt
gaaaatttcatgggaaagaaaacaaacctgcagtccccgcaccagctattgggacctgcc
ggtatcagatgggcaacaatgaacggtggaagggtggatgtttcatctggtaaaagaaga
agtggcccagtaaactcaaaagcttatgttattgctgatgttctaaggacttcaatatac
gaaatagtatcagcattccatgatgagatgttagctggtgctaaagcaagcctccttgag
aaggactggatcaccaatgggaaaccagcttttggtacccgtgagatgcttatacaaaag
ctacgtcttttccttgattatagagctacatag
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