Arachis ipaensis: 107621403
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Entry
107621403 CDS
T04301
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aip03036
]
107621403
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
107621403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
107621403
NCBI-ProteinID:
XP_016178910
LinkDB
All DBs
Position
B10:complement(128337935..128352297)
Genome browser
AA seq
1705 aa
AA seq
DB search
MYIEPLELHDEVLRCNPEAFEYSTTGPVKEQISGRAVGEKKLRESSLPGINQTKEDYNAT
PNRQHDHFSSNDISTLSSKKSKVRKKGGDGISVGPSSAELQDATIGRFREFLEDLCNKAE
VQTDDRDEAEWLPLSLSDLRLLVNEIMSIHEKKLLHIVPVEVLVRILNVLDHQIHRAEGL
SIEDCDNSDSELISSILIALESIHAALAVMAHTEMPKQIYKEEIIERILEFSRRQIMDVM
CASDPSYRALHRPSENTACEVDDYYEENDAEFGSASKKRRTSKSTKMRKSTSNRVSSAVN
TILQKLCTVLGLLKDLLLIERLSDSCILQLVKTSITTFLVENIQLLQLKAIGLLSAIFYL
YTQHRTYVIDEVLQLLWKLPYSKRAIRAYHIREEEQRQIQMVTALLIQLIHCSANLPDAL
RQASSGNAVLEVSVDPNDPIKGHEATTEACCLFWSRVLQRFASVKTQDASELKSIMENLV
TDLLTTLNLPEYPASAPILEVLCVLLLQNAGPKSKDVSARSMAIDILGTIAARLKRDALV
CSQEKFWILQDLHGQDSANQQYPEDSCCVCMDGSTDNLLICHGCQRPFHSDCLGIKEHEV
SNRNWYCQTCICHKQLLVLQSYCNSRCKDDVTKKRNASKDSEISKHEIVQQLLLNYLQDV
TSADDIHLFVCWFYLCLWYKDDPNCQRKPIYHLARMKSRIIVRDSSTISSTLTRDSIKKI
TLVLGQNSSFCRGFDKILHVLLASLRENSPVIRAKALRAVSIIVEADPEVLGDKRVQSAV
EGRFCDSAISVREAALELVGRHIASHPDVGFKYFEKIAERIKDTGVSVRKRAIKLIRDMC
SSNVNFSGYTRACTEIISRISDDESSIQDLVCKTFHEFWFEEPYGSQTQVFGDGSTVPLE
VAKKTEQIVEMLRRMPNNQLLVTVIKRNLSLDFLPQAAKAVGVNPVSLATVRKRCELMCK
CLLEKILQVEEINSNEVEVHALPYVLALHAFCLVDPTLCAPASNPSQFVVTLQPYLKTQV
DNRMVAQLVESIIFVIDAVLPLLRKLPPNIVDELEQDLKHMIVRHSFLTVVHACIKCLCS
VSNIGSKGAAVVEHLIQVFYKCLDNKQQVGRSLFCLGSLIRYGNSLLVSSSNKVIDVRRS
LTLCIKFLSEEDFVVKARSLQALGFILIARPEYMLEKDIGKILEGTLSSNADTRLKIQAL
QNMLEYLLDAESKMGTDKPDDNITGYTVGAVQSVPVAAGAGDTNICGGIIQLYWDNILGR
CLDSNEQVRQSALKIVEVVLRQGLVHPITCVPYLIALETDPLESNAKLAHHLLMNMNEKY
PAFFESRLGDGLQMSFIFMQSISTASENGNQKIPSKIPVSGKGKTESVSLAQARLGVSRI
YKLIRGNRNSRNKFMSSIVRKFDNPKWSHSVIAFLSYCTEVLGLLPFISPDEPLYLIYAI
NRIVQIRAGPLEANFKAWSSRLSRNENQSTPNGNGMYQQETDKSTIITQGTSMDLNGTFQ
QNLDAHPDLNDMRSVDLNGTFYQQPDDTLSNNGSSEPKLHAVGSDYFAFSKDDLERVQAD
CLSAIALQFLLKLKRHLKIMYSLNDARCQAYSPTEQPKPGEVISRQNIPFNISETQFSVP
SNPQELIQRYQEFKYALREDTVDYSLYTANIKRKRPTPRKVRRSGPMASGDLEDDDDDDD
WGGGMRKITSSGGRRANLRSSSRQY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgtacattgagccattggaactccatgatgaggttctcaggtgcaatcctgaagcattt
gaatacagtaccacaggtcctgtcaaggagcagatctctggtcgtgcggtgggtgagaag
aagctccgtgagtcaagtcttcctggcataaatcaaactaaagaagactacaatgcaacc
cctaatcgtcaacatgaccatttttcttcaaatgacatttcaacgttatcttccaaaaaa
tcaaaagtaaggaagaaaggaggcgatggaatttccgtagggcccagttctgccgagctt
caagatgcaaccattggaaggtttcgtgagtttttggaagacttatgcaacaaagctgaa
gttcagactgatgatcgagatgaagcagaatggctgccattgtcactttcagatcttaga
ttgcttgttaatgaaataatgtctatacatgagaagaaacttctgcatattgttcctgtt
gaagtccttgtgaggatactgaatgttctagatcatcaaatacatagggcagaaggcctg
tcaattgaggattgtgataattcagactcggaactaatttcatctattttgatcgcattg
gagtccattcatgctgcactagctgtgatggctcacactgagatgccgaagcaaatttat
aaagaagagatcattgagagaattttggagttttccaggcgtcaaataatggatgttatg
tgtgcaagtgatccatcgtatcgtgcgttacacagacctagtgaaaacactgcatgtgaa
gttgatgattattacgaagaaaatgatgcagaatttggttcggcaagcaagaaacgtcgt
accagcaagagtacaaagatgaggaaatcaacatcaaacagggtttcttctgctgtgaat
actatccttcagaaattatgcactgttcttggattgctgaaggatttgttgttaattgag
aggttatcagatagttgcattcttcaacttgtaaaaacaagcattacaacattcctggtt
gagaatatccagcttttgcagctgaaggcaattggtttacttagcgcgatattctattta
tacacacaacatcgcacatatgtgatagatgaagtgcttcagcttctttggaaattacca
tattcaaaacgagctataagagcctaccacatacgcgaggaagagcaaagacagatccag
atggttaccgctttgctgattcagctaattcactgtagtgctaaccttcccgatgcttta
agacaagcatcaagtggtaatgctgtgttggaagtctcggttgaccctaatgatccaatt
aaaggccatgaagccacaacagaagcttgctgtctattctggagccgtgtacttcagcgg
tttgcaagtgtgaagacccaggatgcttcagagctgaaatccataatggagaatcttgtt
actgatttactcacaactttaaatttgcccgagtatcctgcttcagctcccattttggag
gttctctgtgtcctactacttcagaatgctgggccgaaatctaaggatgtctctgcacgt
tccatggctattgatattcttggtacaattgccgcaaggttgaagcgtgatgctttggtt
tgtagccaggagaagttctggatacttcaggatttacatggtcaggatagtgctaatcag
caatatccagaagattcttgttgtgtctgtatggatggcagtaccgacaatttattgata
tgccatggctgccagagacccttccacagtgactgcctgggtattaaagaacatgaagtt
tccaaccggaactggtactgtcagacatgcatttgtcataagcaactgcttgtattacag
tcatattgcaattcccggtgtaaggatgacgtgacaaagaaacgtaatgcgtcaaaagat
tctgaaatttcaaagcatgaaattgttcaacagttgcttttgaattaccttcaagatgtc
acttctgctgatgatatccatctgttcgtttgctggttttatctctgcctgtggtacaaa
gatgatcctaattgtcagcgaaagcctatataccaccttgctagaatgaaatcaagaatc
attgtacgggactctagtaccatctcatccacgttgacgagggattcaattaagaagatt
actttagttttgggtcaaaacagttcattttgtcgagggtttgataagattcttcacgtg
cttctggcaagcctgagggagaactctccagttatcagggctaaggctttacgagctgtt
agtatcattgtagaggctgatccagaggtattgggtgataaacgagtacagtcagctgtt
gaaggaaggttttgtgactctgcaatttctgttagagaagcagcattggaacttgtcggc
aggcacattgcttcacatccagatgtgggttttaagtattttgaaaagatcgctgagaga
atcaaagatactggagttagtgttcgaaaacgagcaataaaacttattcgagacatgtgc
agttcaaatgtcaacttctctggctatactagggcttgcacagaaataatttcgcgcatt
agtgatgatgagtcaagtatccaggaccttgtttgcaaaacgtttcatgagttctggttt
gaggagccttatggttcacaaactcaggtctttggagatggtagtactgttccactcgag
gtggctaagaaaacagagcaaattgttgaaatgctcaggagaatgcccaacaatcaactt
cttgtaactgtaataaagcgcaacttatcacttgattttttgccccaagctgcaaaagct
gttggtgtcaaccctgtgtcccttgctacagtgcgtaagcgctgtgagttaatgtgcaaa
tgcttgctggagaagatattgcaggttgaggaaattaatagcaatgaagtggaggtgcat
gctctaccatatgtgctggccttgcatgcattttgtcttgtggacccaactctctgtgca
cctgcttcaaacccatcccagtttgttgttactttgcagccatatcttaaaacgcaggtt
gacaatcgcatggttgcacagctagttgagagtataatctttgtaattgatgctgtgttg
cctttacttcggaagttacctccaaatattgttgacgagctagagcaagatttgaaacat
atgattgtccggcattctttcttgacagtagtccatgcttgtatcaagtgcctctgctct
gtaagcaacataggcagtaaaggggctgctgtggtggagcatcttattcaggtcttctac
aaatgtttggacaataagcagcaagttgggcgatcactcttttgtcttggatcactcatt
cgatatggcaattctttgttggtaagctccagcaataaagttattgatgtcagaaggagt
cttaccttgtgtataaagtttctctctgaggaggattttgttgttaaggctagatcattg
caggcactagggtttattttaattgccaggcctgaatacatgttggaaaaggatattgga
aagatactggagggaacattatcttcaaatgctgacactcgtcttaagattcaagcattg
caaaacatgttggagtatctccttgatgctgaaagcaaaatgggaacagataaacctgat
gataacataactggttacacagttggagctgtgcagagtgtacccgttgctgctggagct
ggggacacaaacatatgcgggggtataattcagttatattgggataatattttaggcaga
tgtttggattccaatgaacaagtccgccaatcagctctgaagatagttgaagttgtgttg
cgccaaggtcttgttcacccaatcacttgtgttccatacctaatagcacttgaaactgat
cctctggagtcaaatgcaaagctggctcatcatctcctaatgaatatgaatgagaagtac
cctgcattttttgaaagtcgtttgggtgatggacttcaaatgtcatttattttcatgcaa
tcaattagcactgcttctgaaaatggcaatcagaaaatcccatctaaaatccctgtatct
ggaaaagggaaaaccgaatctgtctcactagctcaagcaagacttggtgtttctagaata
tacaagctcatccgggggaacaggaattcaaggaataaatttatgtcatcaattgtgcga
aaatttgacaatccaaagtggagccattcagtaatagctttcttatcatactgcacagag
gtccttggattgctgcctttcatttcccctgatgagcccctttatctaatatatgccatc
aatcgaatagttcaaattagggctgggccactagaagcgaattttaaagcctggagttca
aggttatcaagaaatgagaatcaaagtacaccgaatgggaatggaatgtatcaacaggag
acagacaagtccactattataacccaaggaacatcaatggatttgaatggaacatttcag
caaaatctagatgctcatccagatttgaatgacatgagatcagtggatttaaatggaaca
ttctaccaacagccagatgatactttatcgaataatggcagctccgaaccaaagctgcat
gctgtgggttctgattattttgccttctcaaaagatgatctggagagagttcaggcagac
tgcttatcagcaattgcactgcaatttctcctaaaattgaagagacatctgaaaatcatg
tatagtctcaatgatgctagatgtcaggcatattcaccaactgaacagccaaaacctgga
gaagttatctccagacagaatatcccatttaatattagtgaaactcagttcagcgtgcct
tcaaatccacaagaattaatacagagataccaggaatttaagtatgcattgagggaagat
acggtggattattcactgtacactgcaaatataaaacggaagcgacctacacccagaaaa
gttcggagatctggacccatggctagtggggacttggaggatgatgatgatgatgatgat
tggggtggtggaatgcgcaagatcacaagtagtggtggccgtagagctaaccttagaagc
agcagtaggcaatattga
DBGET
integrated database retrieval system
