Arachis ipaensis: 107622349
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Entry
107622349 CDS
T04301
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
aip
Arachis ipaensis
Pathway
aip03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107622349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107622349
03036 Chromosome and associated proteins [BR:
aip03036
]
107622349
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107622349
Coactivators
SAGA/TFTC/STAGA complex
107622349
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107622349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
DUF3335
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
107622349
NCBI-ProteinID:
XP_020970586
LinkDB
All DBs
Position
B10:complement(108292139..108301221)
Genome browser
AA seq
1068 aa
AA seq
DB search
MLTASACSSCFFYCLFRNQTLFMPVLRWEQLKVRSGVACSIENHQHNELVIEAVIIITDW
DFFFYLRVGIGIAIAMDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGSASTSGSDP
VLSQGSNNTLTQSMPHWPTPSHENQTQVQNQEPETAQQREQPSSEVEQKQHGSLAEQVQH
VASQDVNNPPLPQHVASLDVNNPPLPQHVGSQSVNNPPLPQHVGSQNVNNPPLPQHVASQ
NVSNPALSQKQTQDEGHQPQPVQASLQNSQTVGIQNLGKDPAPNNEVAKTLNPSSESQQY
AKLQQISNQQATVNEQPGGQINRQKQVPFGMLLPILIPQLPKDRAMQLQTLFSKLKKDEI
AKDSFVRLMKGIVGDQMLKLAWSKVQAQLQAQTRPNQGPVGQQQPVRMPTVGLGARQLND
PHALAQLHQRSMNAAADQSRMTSSAVQTMENNARKSQELDARMETQDLQPSQLSSSNSIT
VSQEAERLSVHVHGLNKQPQPQHLHFPSAYGSSGGNYRPFSGPASSSASSIRPPPHVSHM
SQIPHQSTGPNHLGGATHGFIGMPKLEQQNSLNDPKSLPGGSVALLNNSASQQTPNAWQP
PSNKDQNSGFLSSGSYVKKEPSDMPTEQQHRQNISKIHGLPSANFAQIEQASANQGTMKD
EFSRGLPVSTSMAPTSTGLTSLNSASPSGMAQLDPSVSVPSNTSGITVRAPVKKPSVGQK
KPLEALGSSPPPPPSKKQKGSGGSVEQSIDQLNDVTAVSGVDLREEEEQLFSGPKEDSRV
LEATRRAVQEEEERLILQKIPLQKKMFEIMFKYGLKGVSNDVERCLSLCVEERMRGLISN
LIRMSKQRVDFEKTRHWTVVTSDVQQQIMTINRKVREEWEKRQAEAEKLRKQNDSILKYR
LMVMLELMVTRTRTRVVINHQSKLQVNKEEDDKMRTNAANVAARAAVGGDDMLSKWQLMA
EQARQKREGMRDTSSGSQPAKDVSCKSSASGKSTKDNHEGDKKGSTNFVTSGAIRKHGRN
NSLVTQTKIARSISVKDVIAVLEIEPQMSKSSLIHCLYEKIHSDAQPE
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgctcactgctagtgcttgttcttcgtgttttttttattgtctgttcagaaaccaaacc
ctcttcatgcctgttcttcgatgggagcagctcaaagttaggagtggagtagcttgcagc
attgaaaaccatcagcacaatgaactggtgatagaggcagtcataataataactgattgg
gactttttcttctacttaagagttgggattggaattgccattgccatggatccttctatt
atgaagctcctcgaagatgacgaggatgaaacaatgcattcaggggtggatgttgaagcc
ttccaagctgcactaaacagagacataggaggatctgcttccacttctggttcagaccca
gttttgtctcaaggaagcaacaatacattgactcagtcaatgccacattggccaactcct
agccatgaaaaccaaacccaagttcaaaatcaagagcctgaaactgcacagcaacgagag
cagccttcatctgaggtggagcaaaagcaacatggatctcttgctgaacaagtacagcat
gttgcttcccaggacgtaaataatcctcctttaccacagcatgttgcttccttggacgta
aataatcctcctctaccacagcatgttggttctcagagtgtaaataatcctcctttgcca
cagcatgttggttcccagaatgtaaataatcctcctttgccacagcatgttgcttctcag
aatgtaagtaatcctgctttatcacaaaagcagactcaagatgaaggtcatcaaccacag
cctgtacaagcttctcttcaaaattctcagacagttggaattcaaaatttgggaaaagat
cctgctcctaataatgaggtagccaaaacacttaatcccagcagcgaatctcagcagtat
gcaaagttgcagcaaataagtaatcaacaggctacagtcaatgagcagccaggaggccaa
attaatcgtcaaaaacaggtaccatttggcatgttgctacctatcttgatacctcaactt
cccaaagaccgagccatgcaacttcaaactctatttagtaaattgaagaaagacgaaata
gcaaaagacagttttgtacggcttatgaaaggtattgtaggggaccagatgcttaaatta
gcatggtcaaaagtacaagctcagctacaagcacagacgagacccaaccaaggacctgtg
gggcagcagcaacctgttcggatgcccactgttggcttaggtgcaagacaattaaatgat
ccccatgctttagctcagcttcatcagagaagtatgaatgcagctgcagaccaatctcgt
atgacttcttcagctgtccaaactatggagaacaatgctagaaaatctcaggaattggat
gctagaatggaaactcaggatttgcaaccgagccaattgtcatcttccaattccatcact
gttagtcaggaagcagaaagattatctgttcacgtacacgggcttaataagcagccgcag
cctcagcatctacatttcccatcagcatatggcagtagtggtggtaattataggcctttt
tcagggccagctagtagttctgcttcatctatcagaccaccaccacatgtgtcacatatg
agtcaaattccacatcaaagcactggtcccaatcacttaggtggggcaacacacggcttc
attggtatgccaaaacttgaacagcagaactctttgaatgatcccaagagtctgccgggt
ggctctgttgctctattaaacaattcggcatcccagcaaactccaaatgcatggcaacca
ccatcaaacaaagatcaaaattcaggcttcttgtcatctggttcttatgtcaaaaaggaa
cctagcgacatgcctactgagcagcaacataggcagaatatttctaaaatccatggactg
ccatcggctaattttgcacaaatcgaacaggcaagtgccaatcaaggaactatgaaggat
gagttctcaaggggccttccagtatccacaagtatggcacctacatctactggcttgaca
tcactcaattctgcttctccttctggaatggcccaactagatcctagtgtctcagtgcca
tcaaacacttctggaattaccgtgagggcacctgtgaaaaagccttctgttggccagaag
aaaccacttgaagcacttggttcctcacctcctcctcctccaagtaagaagcaaaaggga
tctgggggatccgttgaacaaagcattgaccagcttaatgatgtcactgctgttagtgga
gtcgatttgagggaagaggaagagcagttattttcaggccccaaggaggacagtcgggtt
ttagaagcaactcgaagagctgtgcaagaagaggaggaaaggctgattttgcagaaaatt
ccactccagaaaaaaatgtttgagattatgtttaagtatggcttgaagggggtgagcaat
gatgtggagagatgcttgtcactgtgtgtggaggaaagaatgcgtggactgataagtaac
ctgattagaatgtcaaaacagcgggttgattttgagaagacaagacattggactgttgtc
acctcagatgttcagcagcaaatcatgacaataaataggaaagtaagagaggagtgggag
aaaagacaggcagaagcagagaagcttcggaaacaaaatgactccattttaaaatatagg
ttgatggtaatgctggagctgatggtgacaaggacaaggacgagggtcgtaataaatcat
caaagtaagctgcaggtgaacaaggaagaggatgacaagatgaggacaaatgcagcaaat
gttgctgcccgtgctgctgttgggggagacgacatgctctcaaaatggcaacttatggcc
gagcaagccaggcagaaacgtgaaggcatgagggacacatcatctggttctcaaccagct
aaagatgtaagttgcaaatcttcagcatctggaaaaagtaccaaggataatcacgaaggg
gataaaaaaggttctactaattttgtaacttcaggggctatcagaaaacatgggagaaat
aattcccttgtgactcaaactaagattgcccgaagcatctctgtcaaggatgtaattgct
gtgctcgaaatagagccacagatgtcgaaatcgtcgctcattcattgcttgtacgagaag
attcattctgatgctcaacctgagtga
DBGET
integrated database retrieval system
