Arachis ipaensis: 107622567
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Entry
107622567 CDS
T04301
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aip
Arachis ipaensis
Pathway
aip03020
RNA polymerase
aip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107622567
09124 Replication and repair
03420 Nucleotide excision repair
107622567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107622567
03400 DNA repair and recombination proteins [BR:
aip03400
]
107622567
Enzymes [BR:
aip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107622567
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107622567
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107622567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
107622567
NCBI-ProteinID:
XP_016179997
LinkDB
All DBs
Position
B10:4541103..4548300
Genome browser
AA seq
1194 aa
AA seq
DB search
MDLEDEQEYEQQMEEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
NLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP
PSTMFVRMLSRASSKGGSSGQYIRATLPYIRSEIPIIIVFRALGFVADKDILEHICYDFS
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
GSAASPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRKLRRRV
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGGWH
DLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYADTYTHCEIHPSLILGVCASI
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
RPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYTRRDH
SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
DMPWTIEGISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKN
SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEVKAAKDHKKKGA
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaagatgagcaagagtacgagcagcaaatggaggaggaggaggatgacgag
gaagagattactcaggaggacgcttgggctgtcatctccgcctacttcgaagagaaggga
cttgttcgccagcagctcgattctttcgacgagttcatccaaaacactatgcaggaaatc
gtggacgaatctgccgacatcgaaatccgccccgaatcccagcacaatcccggtcaccag
tccgattttgcagagactatttacaaaatcagcttcggtcagatttacttgagtaagccc
atgatgactgagtctgatggtgaaactgctaccttattccccaaggcagctaggttgagg
aacctcacctattcggctcctttgtatgttgatgtcaccaaaagggttatcaagaaaggc
catgatggtgaagaagtcactgagacacaggatttcaccaaagtcttcattggcaaggtt
cctattatgctccggtctagttattgcacattgtaccagaattcggagaaggatttgact
gagcttggggagtgcccctatgatcaaggtggatatttcattatcaatggtagtgaaaag
gttctgattgctcaggagaagatgagcaccaatcatgtatatgtcttcaagaagaggcag
cctaacaagtatgcctatgttgcggaggtccgctctatggcagagtctcagaatagacca
cccagtactatgtttgttcgcatgttgtctagggcaagctccaaagggggttcttcagga
caatatatacgtgctactcttccatacattcgatcagaaattccaatcattattgtgttt
cgagcattgggctttgttgctgacaaagatatacttgaacatatttgctacgacttctca
gacactcaaatgatggagttgcttcgtccatccttggaagaagcatttgtgattcaaaat
cagcaggttgcacttgactacattgggaaaagaggagcaactgtaggtgtaactaaggaa
aagagaattaagtatgccaaagagatcctccaaaaggagatgcttcctcatgttggtgtt
ggagaatattgtgagacaaagaaagcatactattttggatatatcattcaccggctactt
ctgtgtgctcttggacggagggctgaagatgatagggatcattatggcaacaaaaggctg
gacctggctgggcctttacttggtggtctctttagaatgctattcagaaagcttactaga
gatgtcaggggctatgtgcagaagtgtgttgataatgggaaagatgtcaacctgcaattt
gctatcaaagcaaaaaccatcacaagtggtcttaaatactcacttgctactggtaattgg
gggcaagcaaatgctgcgggtactagagctggagtatcacaggtgttaaatagattaact
tatgcttccactttgtctcacttgcgaagattgaattctcccatagggcgtgaaggcaag
ttggccaagccaaggcagctgcataattcacaatggggaatgatgtgtcctgcagaaaca
cctgaaggacaagcctgtggactggtgaagaatctggcattgatggtttacataacagtt
ggttcagcagcatctcctattttggagtttttggaagaatggggcaccgaaaattttgag
gaaatttctcctgcagttattccccaagctaccaaaatttttgtaaatggttgctgggtg
ggcatccatcgtgatcccgacatgttggtcagaacgttgagaaagctgagacgccgggtt
gatgttaatactgaagttggggttgttagagatatccgtcttaaagaattgcgtatatat
acagattatggtcgctgcagtcgtcctctattcattgtggacaagcaaaggctacttata
aaaaagaaggacattcatgctttgcaacagagggaatccccggaggagggcggatggcat
gatcttgtgtccaagggcttcatagaatacatagacacagaagaagaagagacaactatg
atttccatgactattaatgatcttgtgcaagcaagacttaatccagaagaagcttatgct
gatacttatactcattgtgaaatccacccgtcactgattttgggtgtttgtgcttctatt
ataccatttcctgatcacaatcagtctccacgtaatacatatcaatctgctatgggaaaa
caagccatgggaatttatgtaaccaattaccaatttcgaatggataccttggcatatgta
ttatattatcctcagaaaccactggtgacaacaagagcaatggagcatctacattttcgg
cagctccctgctggaattaatgccattgtggccattgcctgttattctggttataatcaa
gaagattctgtcatcatgaaccaatcatcaatagatcgtggattcttccggtctctgttt
ttccgatcatatagagatgaagagaagaagatgggaacccttgtcaaagaagattttggt
cgtccagataggaccaacaccatgggtatgaggcacggttcttatgataagctggatgat
gatggccttgcaccaccaggcacacgtgtatctggtgaggatgttattattggaaagacc
accccaatatctcaggaagaggcacagggacaagctgcacgttacacaagacgtgatcac
agcataagcttacggcatagtgaaacgggtattgttgatcaagttcttctgacaacaaat
gctgatggattaagatttgtgaaagtgagggtgagatctgttcggataccacagattggt
gataaattcagtagtagacatggtcagaaggggacagttggtatgacttacacgcaagaa
gacatgccctggaccattgaaggcatctcccctgacattattgtcaatccacatgctatt
ccttctcgtatgactattggccagcttatcgagtgtatcatggggaaggtagcagcacac
atgggaaaggaaggagatgcaactccttttacagatgttactgttgacaacatcagtaaa
gctttacataaatgtgggtaccaaatgcgaggttttgagaccatgtacaatggtcataca
gggaggcggctatctgctatgattttcttgggtcctacatattaccaaagactgaagcat
atggttgatgataagatccattctcgtggacgaggtcctgtgcagatcttgacaaggcaa
cctgctgaaggacgctcacgtgatggaggtctccgatttggggaaatggaacgagattgc
atgatagcccatggagccgcgcacttcctaaaggagagattgtttgatcaaagtgatgca
tatagggttcacgtgtgtgagaaatgtgggttgatagctattgctaacctcaagaagaat
tcttttgagtgcagggggtgcaagaacaaaactgacattgttcaggtttacattccttat
gcttgtaagctgctcttccaagagctcatggctatggcgattgctccaagaatgcttacg
aaggaagtcaaagctgcgaaagatcacaagaagaaaggagcctga
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integrated database retrieval system
