KEGG   Arachis ipaensis: 107622808
Entry
107622808         CDS       T04301                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
aip  Arachis ipaensis
Pathway
aip03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107622808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aip03021]
    107622808
Enzymes [BR:aip01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107622808
Transcription machinery [BR:aip03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     107622808
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 107622808
NCBI-ProteinID: XP_016180334
LinkDB
Position
B10:110830058..110836109
AA seq 1194 aa
MGHIGSSKDVKLYDKGKHDAMDIDSDENFDDDDFPSNGVLRGLGREPLKNFCKKAAELFF
AEYGLISHQINSFNQFIATGVQSAFDSFGDLIVEPGYDPSKKRDENDFYRHAAVKFGKVT
LDRPKFYAGEGHGDFKMLPRHARLQRMTYSSQIKVEIQVQVYVPQMVRSDKFKTGQEQYL
EQKTLKEESREIIIGRLPIMVKSDLCWMKGVEKGDCEFDHGGYFLVKGAEKTFIAQEHIY
LRRLWIIDNPWWSIGYKSQVKRHRLIVKLVGSSSVEGIDSGEKVLTVYFLGIEIPIWVLF
FALGVSSDREVVKLIDFGYDDARVENILLASIRDADESKNYSDFRERKNAVNYIEKGIKG
VQFPPPEPVEDCLRMYIFPNMGGLKKKARFLAYMVKGLLMAYTGRRRCDNRDDFRNKRLE
LAGELLERELKVHIAHARKRMSKALQRDLYADREVRPIEGYLDASIITNGLQRAFSTGAW
SHPYKRLERISGVVATVGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCLLS
TPDGENCGLVKNLAVTGLVSTNITEIILSELLDSGMEELLDDTSTDLGDKDKIFLNGDWV
GVCTNSSAFVTDLRSKRRRNQLPHQMEIKLDKSLKEVRINTDAGRILRPLLVVENLHKIK
ESKGTKWEHSSFKSLLENGVIELIGPEEEEDCRTAWGIRYLFGRDGDKYTHCELDMSFLL
GLSCSLIPFANHDHARRVLYQAQKHSSQAIGFATTNPNIRVDTLSHQLYYPQKPLFRTMT
SDCLGKKWYPLGNSKLPKAEFYNGQVAIVAVNVHMGYNQEDSLVMNRASLQRGMFRSEHI
RSYKSEIDNTESKEKRKDNVNFGKIQSKIGRVDSLDEDGFPYVSANLQSGDIIIGRCAES
GADHSIKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRTPVLGDKFSSMHGQKGVLGFL
ESQENFAFTRHGVVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLRHATPFSTPSVD
DIMDELHRNGFSRCGYERVLNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHP
LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVI
LRPVSGGRKIRGPYCRICESADDIVMVNVPYGAKLLCQELFSMGINLKFETHFC
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgggtcacattggttccagcaaagacgtcaagctctacgacaagggtaagcacgatgca
atggacattgactccgacgaaaacttcgacgacgacgatttcccctcaaacggcgtactc
aggggcttaggccgagagccactcaagaacttctgcaagaaagctgccgagctcttcttc
gcggagtacggcctcattagccaccagatcaattccttcaaccagtttatcgccaccggt
gttcagagcgccttcgattcctttggtgatctcattgtggagcctggttatgatccttcg
aagaaacgcgacgaaaatgatttttaccgtcacgccgccgttaagtttgggaaggtgacg
ctcgaccgacccaagttctatgctggcgaagggcatggagatttcaagatgcttccaaga
catgcacgccttcagaggatgacatactcttcacagattaaagtcgagattcaagttcag
gtgtatgtgccacagatggtgaggagtgacaaatttaagaccgggcaagaacagtacctt
gaacaaaagactctgaaggaagagagcagagaaatcatcattggaagactgcctattatg
gtcaagtctgatctgtgctggatgaaaggggttgagaaaggcgattgtgagtttgatcat
ggagggtacttcctggtcaagggtgctgagaagacttttattgcacaggagcatatctat
ttgagaaggctctggatcatagataatccatggtggtcaatcgggtacaagtctcaagtg
aagaggcatagattgatcgttaagctggtgggaagttcaagtgttgaaggaattgatagt
ggagagaaggtcctaactgtatacttcctgggcattgaaatccccatttgggtgctgttt
tttgctcttggagtctcatctgacagggaggtggtaaagctcattgattttggttatgat
gatgccagagtcgaaaatatccttttggcctctatccgcgatgctgatgagagtaagaat
tattccgatttccgtgaacggaagaatgcagtgaattacatagagaagggtattaaaggt
gtccagtttccacctcctgaacctgttgaagactgcttgagaatgtatatttttcccaac
atgggaggcttgaagaaaaaggcacgattccttgcatatatggtgaaaggtctcttaatg
gcttatactggccgcagaaggtgtgataaccgggatgattttcgaaataagaggcttgag
ttggctggggagcttttagagcgtgagctgaaagtgcacattgcacatgctcggaagcga
atgtcaaaggcattgcagagagacctctatgcagaccgtgaagtccgcccaattgaaggc
tatcttgatgcttcgataattacaaatggtctccaaagagcattctccactggagcgtgg
tctcatccttacaagagattggaaaggatttctggggtggttgcaactgttgggcgaacc
aaccctttacaaactatggctgagttgagaaggacaaggcagcaggttcagtacactgga
aaagttggtgatgctagatacccgcatccttctcactgggggaaggtctgcctcctctct
accccagatggtgaaaactgtggcctggtgaaaaatttggctgttactggactggtaagc
accaacataactgaaatcatattgtctgagttgcttgactctggtatggaagagttactt
gatgacacttctactgacttgggcgacaaggataagatcttcctaaatggggattgggtt
ggtgtgtgcacaaattccagtgcatttgttacagatctcagaagtaaaaggcgtagaaat
caattacctcatcagatggagatcaaattggacaaatctctaaaagaagtgcgcataaac
actgatgcaggaaggattctacgtccacttttggtagttgaaaaccttcacaagataaaa
gaatcaaaaggaactaaatgggagcattcttctttcaaatcccttttggagaatggagtg
atcgaacttattgggcccgaagaagaggaagactgccgtactgcatggggtatcagatat
ttgtttgggagagatggcgacaaatacacccactgtgaacttgacatgtcatttttactg
ggtttaagctgttcactgataccgtttgccaatcatgaccatgcaaggagggtactctac
caggcccagaagcactcctcgcaggccattgggtttgctaccacaaaccccaacatcaga
gtggacaccttgtcacaccagttgtactatccccagaagcccctcttccgtaccatgact
tctgattgtcttggtaagaaatggtatccactgggtaatagtaaacttccaaaggctgaa
ttctataatgggcaagttgcaattgtggctgttaatgtgcatatgggatacaatcaagag
gattcattggtgatgaaccgtgcttctttgcagcgtggtatgttcagatctgagcatata
aggagttacaagtccgaaattgataatactgaatctaaggagaagcggaaggataatgtg
aattttgggaagatacaaagtaaaattggccgtgttgatagccttgacgaagatggattt
ccatacgtcagtgcaaatttgcaaagtggtgatattattattggtcgttgtgccgaatct
ggagcagaccatagcataaagttaaaacacaccgaaagagggtatgttcagaaggttgtg
ctgtcctcaaatgacgaagggaagaatttcgctgtggtttcattgagacaggttcgaact
cccgttcttggagacaagttttcaagcatgcatggtcaaaagggtgtcttgggatttctg
gagtctcaggaaaatttcgctttcacaagacatggtgtggttcccgatattgtcattaat
ccacacgcattcccctcacgacaaacaccaggacaactccttgaggctgctttggggaag
ggcattgctcttggtggttctttgaggcatgctaccccgttctccacaccctctgttgat
gacatcatggatgagctccacagaaatgggttttcaagatgtggatatgagagagtacta
aatgggagaactggtgagatggtccgttcactaatatttatgggaccaacattctaccag
cgtctacaccacatgtctgaggacaaagtaaaattcaggaatacaggtcccgttcatcca
ctgacacgacaacctgtagcggataggaagcggttcggaggtatcaaatttggtgaaatg
gagcgagactgcctcatagctcacggcgcatcagccaacctgtatgaacgcctctttacg
ctcagtgactcctctcagatacacatctgtagtaaatgcaaaaatgtagctaatgtgata
ttgcggccagtatctggtggccgcaagataaggggtccatactgccgcatatgtgaatct
gcggatgacattgtgatggtcaatgtcccatatggagccaaattgttgtgccaagagctt
tttagcatgggcataaatctcaaatttgaaacccatttctgctag

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