Arachis ipaensis: 107622835
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Entry
107622835 CDS
T04301
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
aip
Arachis ipaensis
Pathway
aip04120
Ubiquitin mediated proteolysis
aip04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107622835
04120 Ubiquitin mediated proteolysis
107622835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aip04121
]
107622835
Enzymes [BR:
aip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107622835
Ubiquitin system [BR:
aip04121
]
Ubiquitin ligases (E3)
U-box type E3
107622835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF6730
Motif
Other DBs
NCBI-GeneID:
107622835
NCBI-ProteinID:
XP_016180364
LinkDB
All DBs
Position
B10:complement(128028401..128034430)
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AA seq
1038 aa
AA seq
DB search
MAAAKPQRTPQEVEDIIIRKIFLVSITDSAATNADSRNVYLELTAAEILSEGKDLRLSRD
LMERVLIDRLSGDFPGVGESPFQYLTGCYHRAHEEAKKIANMKDKTLRSEMEAVVKQAKK
LCVSYCRIHLGNPELFQNRNQSSGSGTASPLLPLIFAEVGGGIDAFGGSSGGGGPKSPPG
FLEEFFRDSDFDSLDPILKGLYEELRGSVMKVSALGNFQDSLRALLFLVRFPVGAKSLVS
HEWWIPKGVYMNGRAIEMTSILGPFFHISALPDQTFFRSQPDVGQQCFSDASTRRPADLL
SSFSTIKTVMNNLYDGLYEVLFILLKSKDTRDSVLEYLAEVININASRAHIQVDPITCAS
SGMFVNLSAVMLHLCEPFLDANLTKRNKIDPKYVHYSNRLKLSGLTALHASSEEVTEWLN
SNKRANGNNQNNDGQKRLEQSQEASSSGSNAGELSNEISGHGEKTEYHFICECFFMTARV
LNLGLLKAFSDFKHLVQDISRCEDALSTLKAMQEQSPTPQLQLDITRLEKELESYSQEKL
CYEAQILRDNTLIQNALSFYRLMIVWLVSLVGGFKMPLPSTCPMEFATMPEHFVEDAMEL
LIFASRIPKALDGVVLDEFMNFIIMFMASPEFIKNPYLRAKMVEVLNCWMPRRSGSSATA
TLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAW
RQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPLQERQE
RTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGP
QRKSLSLKDPEKYEFRPKHLLKQIVHVYVHLARGDSNSIFPAAISKDGRSYNDQLFSAAA
EVLHIIGEDGRIIQEFIQLGAKAKVAASEAMDTEATLGEIPDEFLDPIQYTLMKDPVILP
SSRIVVDRPVIQRHLLSDSSDPFNRSHLTADMLIPDTELKARIEEFVKSQEMKKRSEGIS
IQSTKDTIQTTNGEMLID
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcaaaacctcagaggactccacaggaagtggaggacataatcatccgcaaa
atctttctcgtgtcgatcaccgattccgccgcgactaacgccgattccagaaacgtctat
ttggagctcacagcggcggagattcttagcgaaggcaaggacctccgcctctcgcgcgat
ttgatggagcgagtcctcattgatcgactatccggcgactttcccggcgtcggagaatcc
ccgttccagtacctcaccggttgctaccaccgcgcgcatgaggaggcaaagaaaatcgcc
aacatgaaggacaaaaccctcaggtcggagatggaggcggtggtgaaacaggccaagaaa
ctgtgcgtctcatactgcaggattcacctcggcaatccggagctgtttcagaaccggaat
caaagttccggttcgggaaccgcgtcgcctctgctgccactgatattcgcggaggttggc
ggtggcatcgacgcgttcggaggtagcagtggtggcggagggccaaagagtccaccgggg
tttcttgaggagttctttagggactcggattttgacagcctggacccaatcttgaaagga
ctgtatgaggagctgagaggaagtgtgatgaaggtttctgctcttgggaactttcaggac
tctttgagggctttgttgttcttggtgagattccctgttggtgcaaagtcacttgtgagc
cacgagtggtggattcccaaaggggtttatatgaatggccgtgccattgagatgaccagc
attttgggtcccttctttcacattagtgctcttcctgatcaaacctttttcaggagccag
cctgacgttggacaacagtgcttttctgatgcatcaactcgacgaccagcagatttatta
tcttcattctcgactatcaaaactgtcatgaataatttgtatgatggcctgtatgaagtt
ctcttcattctccttaagagtaaagatactcgtgatagtgtacttgagtatctcgccgag
gtgatcaatataaatgcatccagggctcatatacaggttgaccctataacttgtgcaagt
tcaggcatgtttgtaaatctcagtgctgtcatgcttcatctttgtgagccatttttggat
gcaaatttaaccaaaaggaataaaattgatccaaaatatgtacactactccaaccgtttg
aagctaagtgggttgactgctctacatgcatcatcggaagaagttactgaatggcttaat
agcaataaacgggctaatggaaacaatcaaaataatgatggccagaaacgcttggagcaa
tctcaagaagcaagtagttctggtagtaatgctggtgagctttcaaatgaaatttctgga
catggtgaaaagacggaatatcatttcatttgtgaatgcttctttatgactgcaagagtg
ctcaacttgggccttttaaaagcattttctgatttcaaacacttagttcaggatatttct
agatgtgaagatgctctttcaacactaaaagccatgcaagagcaatctcccaccccccaa
ttgcaattggatataactagacttgagaaagaattggaatcgtactcacaggaaaagctt
tgttatgaagctcaaatattgcgggataacacgcttattcagaatgcactatccttctac
cgtttgatgattgtttggttggttagcttggttggtggatttaagatgcctctaccatcg
acttgcccaatggaatttgccactatgcctgagcattttgtagaagatgccatggaactt
ctaatatttgcttcccggattcccaaggccttggatggagttgtgctggatgagtttatg
aacttcataattatgtttatggctagccctgaattcatcaaaaacccatatttaagagca
aagatggtcgaagtcttgaactgttggatgccccgtaggagcggttcatctgccacagct
actttatttgaaggccaccaactgtctctggagtatcttgtgaggaatcttctaaaactc
tatgttgacattgagttcaccgggtctcacacgcagttctatgacaaatttaatatccgc
cataatatagccgaactccttgaatacctgtggcaggtccctagtcatcgtaatgcttgg
agacagattgctaaggaagaggaaaagggtgtttatctgaatttcttaaacttcctgatt
aatgatagtatttatcttcttgatgaaagtctcaacaaaattcttgagctaaaagagttg
gaggctgaaatgtcaaatacagctgagtgggaacgacggccacttcaagagaggcaggag
aggacacggttattccattctcaagaaaatattattcggatagatatgaagttggcaaat
gaagatgtgagtatgcttgcatttacatcagagcagattactgctccattcctacttcca
gagatggttgaaagagtggctagtatgctcaattactttctgctgcaactagtgggtccc
caaagaaaatcccttagtctgaaagatcctgagaaatatgaatttcggccaaagcatttg
cttaaacagattgtgcacgtatatgttcacctggcaagaggtgattcaaattccatcttc
ccagctgccatctccaaggatggtcgatcatacaatgatcagttgtttagtgctgcagca
gaggttcttcatataataggtgaggatgggagaatcatacaagaattcattcaactcggt
gctaaggcaaaagttgcagcttctgaagccatggatactgaagctaccttgggagaaatt
ccagatgaattccttgatccaattcaatacactttaatgaaggatcctgtcatcttacct
tcttcaagaatcgtagttgatcgacctgtcatacagaggcaccttcttagtgatagctcc
gacccattcaaccgatcccatcttaccgccgacatgttgattcctgatactgaactcaaa
gcaagaatagaggagtttgtcaagtcccaggaaatgaagaaacgtagtgaaggtataagc
atacagagcaccaaggacacgattcagacaacaaatggggaaatgttgatcgactag
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integrated database retrieval system
