Arachis ipaensis: 107622906
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Entry
107622906 CDS
T04301
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin protein ligase RIN2
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
aip
Arachis ipaensis
Pathway
aip04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107622906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aip04121
]
107622906
Enzymes [BR:
aip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
107622906
Ubiquitin system [BR:
aip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107622906
Multi subunit type E3
ERAD complex
107622906
LMBR1L-GP78-UBAC2 complex
107622906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
CUE
zf-rbx1
zf-RING_UBOX
U-box_ZFPL1
zf-C3HC4_2
zf-RING_11
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-ANAPC11
zf-RING_16
E3_UbLigase_EDD
PHD
zf-RING_Vps41
RINGv
zf_RING_Vps8_fungal
zf-HC5HC2H
PHD_NSD
zf-C3HC4_IRF-2BP1_2
Motif
Other DBs
NCBI-GeneID:
107622906
NCBI-ProteinID:
XP_020970474
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All DBs
Position
B10:133802589..133811898
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AA seq
559 aa
AA seq
DB search
MALRIIAISGVSTVLSFIALHFCSEFSLYKXTTIGLLANCFINVFILINLCLKAMFFTEL
YSSETRKLIERLVNYIIYKGTFLPLIVPPTIYQAGLWSTWLTVLCSLKMFQALARDRLER
LNASPSVTPWTYLRVYSALLFVFFIDVFWIRFCVSVYRSDPSSLHLLLFFEPLSIAFETL
QAILVHGFQFLDIWLPHSACNSSDCQMPKLFNTLTAGVLLEWKGTLIRNFGFFLDMATFL
MALGHYLYIWRLHGMAFHLVDAVLFLNIRALLGAIINRIKSFHRLRIALGALNAALPDAT
DAELRAYDDECAICRESMAKAKRLNCNHLFHLACLRSWLDQGLTEMYTCPTCRKPLFPGR
SENETSSNVGGISSDEQLVRNTNAGLDRQNSARNTMPAVLYPNHIPNSADNVPWRGAGLD
SGWLHSWPNQGIDGAGPSSTTIRTVGLGRVQMMMRQLTSVGETYAQGAFEDASWSLWPIN
PSQASSSNPTVSVGERPSGGSGSLHRRTGSQSANDNMANILAMAETVREVLPHIPDDIIF
QDLQRTNSVTVTVNNLLQM
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaggatcatagcaatttctggggtttctacagtgttaagctttattgctttg
cacttctgctcagaattttcactatacaaanctaccaccattgggttgttggcgaattgc
ttcatcaatgttttcattcttatcaatctttgtctcaaggctatgttcttcacggagttg
tattcttctgaaactcgtaaactaattgaacgactcgttaattatattatttacaagggg
acatttctaccactgattgtgccaccgacaatatatcaggctggtctttggtcaacatgg
ttgactgtgctctgttctttaaagatgtttcaagctttggctagagatcgtttggagcgg
ctgaatgcatctccatctgtgacaccttggacatatcttcgtgtatattcagcattgtta
ttcgttttcttcattgatgttttctggataaggttttgtgtgtcagtatatagaagcgat
ccgtcctctctgcatctgttactattctttgagccattaagtattgcttttgagacccta
caggccattttggtgcatggatttcagttccttgacatatggcttcctcattcagcttgc
aacagcagtgattgccaaatgcctaaactgtttaatacactaacagcaggtgtcttactg
gaatggaagggaactcttattcggaacttcgggtttttcctcgatatggcaacattttta
atggcacttggccattacctgtacatatggcgtcttcatgggatggcttttcatctagta
gacgcagtgttgttcctaaacatacgggcattgcttggtgcaattataaatcgtattaaa
agctttcataggttaaggatagctctaggagcacttaatgctgctcttcctgatgcgaca
gatgcggagttaagagcatacgatgatgaatgcgctatttgtagagaatccatggctaag
gcaaaaaggttaaactgcaatcaccttttccatcttgcatgtttgagatcctggttggat
caaggcctgactgaaatgtatacttgtcccacatgccgaaagcctcttttcccaggccgg
tcagaaaatgaaacaagctccaatgttgggggaatatctagtgacgagcaactggtacgc
aatacaaatgcaggactggatcggcaaaactctgctagaaataccatgcctgcagtattg
tatcccaatcatataccaaactcggcagacaatgtcccttggaggggtgcaggactggac
tcaggctggttgcattcttggccaaatcagggtattgatggagctggtccatcatctaca
acaatcagaacggttggattaggaagagttcaaatgatgatgaggcagctaacatctgtg
ggagaaacctatgcccagggtgcctttgaagatgcttcctggagcctctggcctattaat
ccctcccaggcttcttctagtaatcctaccgtttctgtaggtgagaggccgtcaggagga
tcaggtagcttacatagaagaactggttcgcaatctgcaaatgataatatggctaatatt
cttgctatggccgaaactgttcgggaggttttacctcatattccagatgacataatattc
caggacttgcagagaacaaactctgtcacagttactgtgaataatcttcttcaaatgtaa
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