Arachis ipaensis: 107622988
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Entry
107622988 CDS
T04301
Name
(RefSeq) flowering time control protein FY isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
aip
Arachis ipaensis
Pathway
aip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107622988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107622988
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107622988
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ASA1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_Aladin
CFAP251_N
Beta-prop_WDR41
Beta-prop_NOL10_N
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_Vps41
NBCH_WD40
WD40_RFWD3
Beta-prop_HPS5
WD40_like
Tricorn_2nd
PAC11
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
107622988
NCBI-ProteinID:
XP_016180561
LinkDB
All DBs
Position
B10:complement(134596970..134605953)
Genome browser
AA seq
725 aa
AA seq
DB search
MMYNDPHHHHHQQPQPHFHHQQPPPPPPPQQQQQPGPDFHRGPPPPPQMMRQPSAGSSTE
FHHPAPGGPPPHYDGHGDSHGAKRIRKLTQRKAVDYTSTVVRYMQVRMWQRDSRDRTVLQ
PTPAAAIDMLPAAGYPDNPSTSFAAKFVHTSLNKNRCPINRVVWTPTGRRLITGSQTGEF
TLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHK
ESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSG
GKDQLVKLWDAKTGRELCSFHGHKSTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELE
SFRGHRKDVTALAWHPFHEEYFVSGSYDGAIFHWLVGHDTPQIEIPNAHDNNVWDLAWHP
IGYLLCSGSSDHTTKFWCRNRPGDTGRDRFNMGMQGYAEQTPVAGRVGGNFPVPEGPTTP
GPFAPGLTRNEGTIPGVGVAMPLAIPSLDTPQGDQQSHPVSMGAPPLPPGPHPSLLASNQ
QQPYQQNPQQMPQHQHQGMPHQMGPIPMHPNMPQLQHPSHSPMLPHPHMPRPPSQMPPLG
MAGSMPMISSVPPSHPKPMSGPMGMQGAMNQMGPPMPQGPYVGMNQMHSGSMPNSGGPPI
GGFPGNMPNMQAPSNAGYGQGGSFNRPQGGQMPMMQGYNPYQSGNQSGLPPNAQPGHGSH
TQMPQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacaacgaccctcaccaccaccaccatcagcagcctcagccgcatttccaccac
caacagcctccgccgccgccgccgccgcagcagcagcagcagccaggtcctgatttccac
cgtggacccccgcctcctccgcagatgatgcgtcagccttctgctggttcctccactgaa
tttcaccaccccgctcccggaggccctcctcctcactacgacggtcatggcgatagtcac
ggtgcaaaaaggataagaaagcttactcaacggaaagcagttgattacacaagcaccgtc
gtgcggtatatgcaggttcgaatgtggcagagggattcgagggataggacggtattgcaa
cctaccccagccgcagcaattgatatgttgccagctgctgggtacccggacaatccatct
accagctttgctgccaagtttgttcatacctctttaaataaaaatcgatgtccaattaac
agggttgtgtggactccaacgggtcggcgtcttatcacaggttctcagactggtgaattt
accctctggaatggacaatcttttaattttgaaatgattcttcaggctcacgaccaagca
attagatccatggtttggagtcacaatgacaactggatggtctcgggtgatgatggtggt
gcaataaaatattggcagaacaacatgaataatgttaaagccaacaaatctgctcataag
gaatcagtccgtgacttaagtttctgtagaacagatttaaagttctgttcgtgctctgat
gataccacagttaaagtatgggattttgcaagatgtcaagaagagcgttctttaactggc
catggttgggatgttaagagtgttgactggcatcctacaaaatctctattagtatcaggt
ggcaaggaccagcttgtaaaactctgggatgctaaaacaggaagagagctttgctcattt
cacggccataaaagtactgtactctgtgtcaaatggaatcaaaatggcaactgggtgctg
acagcctcaaaggatcaaataataaagctttatgacataagggctatgaaggagcttgaa
tctttccgtggacatcggaaggatgtaactgctttggcgtggcatccgtttcatgaagag
tactttgtcagtggaagttacgatggtgcaatattccattggcttgttgggcatgataca
ccgcaaattgaaattccaaatgctcatgataataatgtgtgggaccttgcatggcatcct
atcggatatcttctctgcagtggtagcagtgatcacacaacaaagttttggtgtcggaat
aggccaggagacactggtcgtgatagatttaacatgggtatgcaaggatatgctgagcaa
actcctgtagctggtcgagttggtggtaattttcctgtacctgagggtccaacaacccca
ggaccatttgcccctgggttgactcgaaatgagggtacaattccaggtgttggagttgca
atgcccctggccattccttcgcttgatacacctcagggagaccagcaatctcatccagta
tcaatgggtgcccctcctcttcccccaggtccacatccttctcttcttgcgtccaatcaa
cagcaaccgtaccagcagaatcctcagcagatgccacaacatcaacaccagggaatgcca
catcagatgggtccaattcctatgcatccaaatatgccacagctacaacatccttcccat
tcacccatgctccctcatccacatatgcctcgccccccaagccaaatgccccctcttgga
atggccggatccatgccaatgatttcttcggtgcctccatctcatccaaagccaatgtca
ggtcctatggggatgcaaggtgcaatgaatcagatggggcctcctatgccacaaggtccc
tatgttggcatgaatcaaatgcattcaggatccatgcccaatagtggagggcctcctatt
ggaggctttccaggcaacatgcctaacatgcaggcaccatcaaatgctggttatggtcaa
ggtggttcattcaaccgacctcaaggtggacaaatgccaatgatgcaagggtataatcct
taccagtctggaaatcaatctgggcttcctccaaacgcacaacctggtcatggctcacac
actcaaatgcctcaatag
DBGET
integrated database retrieval system
