KEGG   Arachis ipaensis: 107623020
Entry
107623020         CDS       T04301                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1-like
  KO
K14962  COMPASS component SWD2
Organism
aip  Arachis ipaensis
Pathway
aip03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107623020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aip03019]
    107623020
   03036 Chromosome and associated proteins [BR:aip03036]
    107623020
Messenger RNA biogenesis [BR:aip03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     107623020
Chromosome and associated proteins [BR:aip03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     107623020
    COMPASS/SET1 complex (yeast)
     107623020
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR75_1st KNTC1_N Beta-prop_VPS8 Beta-prop_NUP159_NUP214 PQQ_2 WD_LRWD1 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Cytochrom_D1 VPS11_N
Other DBs
NCBI-GeneID: 107623020
NCBI-ProteinID: XP_016180628
LinkDB
Position
B10:complement(23060243..23064122)
AA seq 342 aa
MFLRSKKMGGIQQENREEKVSLELSEEILQSMEVGMAFKDYNCKISSMDFHRATSYLVTA
SNDESIRLYDVTAGTCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDESLRLLSLHDNK
YLRYFKGHHDRVVSLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAISYDDQ
GLVFAIAFGGYIRMFDARKYEKGPFEIFSIGGDISDANTVKFSNDGRLMLLTTADGHIHV
LDSFRGTLLSTYNVTPVSCNSTLEASFSPEGMFVISGSGDGSIYAWSVRSGKEVGSWRSA
TADTGPPVIKWAPGSLMFATGSSELSFWVPDLSKLGSYVGRK
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgtttcttcgctccaaaaaaatgggcgggatacagcaggaaaacagagaagagaaggtg
tctttggagctcagtgaggaaattcttcagagcatggaagttggaatggctttcaaagac
tataattgtaaaattagttccatggattttcacagggcaaccagctatctagtcactgct
agcaatgatgaatccattcgtctctatgatgtcactgccggaacatgtttgaagacaatt
aacagcaagaagtatggggttgacttggtttgtttcacgtctcatccgaccactgttata
tactcgtctagaaatgggtgggatgaatctctgcggcttctatcgttgcatgataacaag
tatttgagatatttcaaaggccatcatgacagggttgtctcacttagcttgtgctcccgg
aaggagtgctttatttctggatctcttgatcgaactgttttactatgggatcaaagggcc
gagaaatgccagggacttttacgtgtacaaggaaggcctgctatttcatatgatgatcaa
gggcttgtttttgcaattgcctttggaggatacataagaatgtttgatgctcgcaagtat
gaaaagggtccctttgagatcttttctattggaggagatatttctgatgcaaatacagtg
aaatttagtaacgatgggagacttatgcttttaacaactgcagatgggcatattcatgtt
cttgattcatttcgtggcacacttttatcaacgtataatgtcacacctgtctcgtgcaac
tccacattagaagcttctttcagtccagagggaatgtttgtaatatcaggttctggggat
ggcagcatttatgcatggagtgttcgaagtggtaaagaggttggtagctggaggagtgca
actgctgatactggaccaccggtgataaaatgggcaccgggaagtctcatgttcgcaacc
ggatcttctgagctatcattttgggtcccagatttgtctaagttgggatcttatgttgga
agaaagtaa

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