Arachis ipaensis: 107623179
Help
Entry
107623179 CDS
T04301
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aip03041
]
107623179
03009 Ribosome biogenesis [BR:
aip03009
]
107623179
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107623179
Spliceosome [BR:
aip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107623179
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
90S particles
Helicases
107623179
Pre-60S particles
107623179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Cas3-like_C_2
DUF4592
Motif
Other DBs
NCBI-GeneID:
107623179
NCBI-ProteinID:
XP_016180836
LinkDB
All DBs
Position
B10:complement(120349850..120357142)
Genome browser
AA seq
548 aa
AA seq
DB search
MTEPELNHAEDQSNNNKKLRKRKRPRKAQQEARNSADDEDQEQEQHNDANNTDEVEEEEK
REEKNVIPGVESGIMSSVPFDSLELSDPTSKAIMDMGFNRMTQIQARAIPELLKGKDVLG
AARTGSGKTLAFLIPAVELLYNAEFKPRNGTAVIVICPTRELAIQTHAVAKELLKYHSQT
LGLVIGGSGRKREADRIISGVNLLVATPGRLLDHLQNTKGFIYKNLKCLIIDEADRILEA
NFEEEMKQIINILPKTRQTALFSATQTKKVKDLARMSFQTTPSNIDVDDGRKKVTNEGLQ
QGYVVVPCAKRFVVLYSFLRRHQSKKVMVFFSSCNSVKFHADLLKCAGLDCLNIHGKQKQ
HARTTTFFNFCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARGEG
AKGNALLFLIEEELQFLRYLKAAKIPMKEYVFEHKKLANIQSQLEKLVAGIYHLNVMAKD
AYRSFILAYNAHTMKDIFNVHRLDLQAVAASFCFSNPPKVNLNLDSSASKHRRKIRKVEG
RLSDGKTK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaccggagctcaaccatgcggaggaccaatcaaacaacaacaagaagctccgc
aaaaggaaaaggcctcgcaaagcccaacaagaagctcgcaattccgccgatgatgaagac
caagaacaagagcagcacaacgacgctaacaacaccgatgaagtagaagaagaagaaaaa
agagaagagaaaaatgtgatacctggcgttgaatctggaatcatgagttccgttccattc
gattctcttgaactctctgatcccacttccaaggctattatggacatgggtttcaatcga
atgactcagattcaagcgagagctattcctgagcttttgaaagggaaagatgttcttggt
gccgcgaggactggttctgggaaaacccttgcatttttaatcccggctgtggaattgttg
tacaatgccgagtttaaacctcgcaatggaaccgccgttattgtcatatgtccaactaga
gagcttgcaattcagacacatgcggtggcaaaggaattgctcaagtatcattcacaaact
cttggattagttattgggggatcaggtagaaaacgagaagctgatcgcattatttctggg
gtaaatctgttggtggccacacctggtcgcctacttgatcaccttcaaaatacaaaggga
ttcatatacaaaaatttgaagtgcctcattattgatgaagctgacaggatattagaagca
aactttgaggaggaaatgaagcagatcattaatatacttccaaagactaggcaaacagct
ttgttttcagctacgcaaacaaagaaggttaaggatcttgcccgtatgtcatttcagaca
actccttccaatattgatgtagatgatgggagaaaaaaggtcacaaatgaaggattgcag
caaggctatgttgttgttccatgtgctaagcgttttgttgttctatattcattcttgagg
aggcatcaatcgaaaaaagtgatggtctttttctcttcatgcaactctgtcaaattccat
gcagatcttctcaagtgtgctggattggattgcttaaatattcatggaaaacaaaagcag
catgcccgaacaactacattctttaatttctgcaaagcagaaaaggggatattgctttgt
actgatgttgctgctcgtggacttgacatacctgatgtggactggattgtgcagtatgat
ccacctgatgagccaaaggaatatatccatagggttggtagaacagctcgtggggaaggt
gccaaaggaaatgctttgctttttctgattgaggaagaattgcaatttcttcgctatctt
aaggcagcgaagatccctatgaaagagtatgtatttgaacacaagaagcttgcgaatata
cagtctcaactggaaaagttggttgcggggatctatcatttgaatgttatggctaaagac
gcgtataggtcatttatattagcatataatgcccacaccatgaaggatatattcaatgtt
caccgccttgatctacaggccgttgctgcttcgttctgtttttcaaacccgccgaaggtg
aatctgaacttagacagcagtgcttcaaagcataggaggaaaatacgcaaagtggaagga
agattaagcgatggaaagacaaaataa
DBGET
integrated database retrieval system
