Arachis ipaensis: 107623298
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Entry
107623298 CDS
T04301
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
aip
Arachis ipaensis
Pathway
aip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107623298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107623298
03036 Chromosome and associated proteins [BR:
aip03036
]
107623298
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107623298
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107623298
PBAF complex
107623298
GBAF(ncBAF) complex
107623298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
HU-HIG
Motif
Other DBs
NCBI-GeneID:
107623298
NCBI-ProteinID:
XP_016180992
LinkDB
All DBs
Position
B10:132882411..132885123
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AA seq
544 aa
AA seq
DB search
MSNNNNNNPSKGIGAPSSSASFGNSAMPSPGNPGFSQSQAQAQLAAGFQGQFPMSQAHAI
AQAQSKAAQAHAAQAAVHAQFQAHLQAQSLALNQGQSVGLGNLGVSSPSVSTPGNMSGKR
IPLKPPIRPVGYSPPNTFSPLRPMELTPAARRKKQKVPEKQLQDKVAAILPESALYTQLL
EFESRVDAALARKKVDIQEALKNPPCIQKTLRIYVFNTFNNQIRTIPNKPNAEPPTWTLK
IVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIIQWENSRSSAP
QEGFEVKRKGDKEFTATIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIIAAIWHYVKAR
KLQNPSDPSFFHCDQPLQKVFGEDKMKFTMVSQKISHHLFPPQPVLLEHKIKLSGNCPTG
TACYDVTVDVPFPIQRELSVLLANVEKNKEIELCDESICGIIRKIHEHRRRRAFFLGFSQ
SPVDFINAMIESQSRDLKLAAGEPSRNTEKEHRSDFYNQPWVEDAVIRYLNRKPASGSDA
PGST
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaacaacaataataatccttctaagggtattggggctccgtcctcgtcggct
tccttcggaaattcggcaatgccctcccccggaaaccctggtttctcacaatcccaagca
caagcacagcttgctgctggttttcaagggcagttcccaatgtcccaagcccacgccatt
gctcaagctcagtccaaagcagctcaagctcatgctgcccaagctgctgttcatgctcaa
ttccaggctcacttgcaggctcagagtttggctttaaatcaaggccagtctgttggtttg
gggaatttgggggtgtcatcgccgtcagtgtctacacctggcaatatgagtggaaaaagg
atcccattgaaaccccctattcgccctgtagggtattctcctccaaacacattctcgcct
ctaagaccgatggaactaacgcctgctgctcgaaggaagaagcagaaggtccctgagaag
caacttcaggataaagtagctgctatcctgccagagtctgctctgtatactcagcttctt
gagtttgagtctcgggttgatgctgcgcttgctaggaagaaggttgacatccaagaagcg
cttaaaaatccgccttgtattcagaagactcttcgcatatatgtcttcaacacttttaat
aatcaaattcgcacaattcccaataagccaaatgccgagccacctacttggacgttgaag
atagttgggaggatattggaagatggcgtagaccctgatcagcctggggtggtgcagaag
tcgtctccgttgtatccaaagttctcagctttcttcaagagagtaacgatttctttggat
cagagactctatcctgataaccacattattcagtgggagaattctcgatcttctgctcct
caggaaggttttgaagtaaagaggaaaggggacaaggaatttacggcgacaatacggttg
gaaatgaattatgtccccgagaaatttaagctttcaccagcattgactgaggttcttggt
attgaggttgatactcgtcctagaattattgctgcaatatggcattatgtaaaggccagg
aagttgcaaaacccaagtgacccttctttctttcactgcgatcagcctctgcagaaagta
tttggtgaagataagatgaaatttactatggtttcacagaaaatatcacaccatttgttt
cctccacagcctgtacttttagagcataagatcaagctctcgggaaattgtccaactgga
actgcttgttatgatgtaactgttgatgttccatttcctattcagagggagttgtctgta
ctattggccaatgtggagaagaacaaagagattgagctatgtgatgaatcgatatgtgga
atcattagaaaaatccacgagcaccgtaggagacgagcattctttcttggtttcagtcaa
tctcctgtagattttattaatgccatgatcgagtctcaaagcagggatctgaaacttgca
gctggagaacccagtcgcaacactgaaaaagagcatcgatcggatttctacaaccaacca
tgggtcgaagatgctgttattaggtatttgaatcgcaaaccggcatcagggagcgacgca
ccaggaagcacgtga
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