Arachis ipaensis: 107623549
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Entry
107623549 CDS
T04301
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
aip
Arachis ipaensis
Pathway
aip03022
Basal transcription factors
aip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107623549
09124 Replication and repair
03420 Nucleotide excision repair
107623549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107623549
03400 DNA repair and recombination proteins [BR:
aip03400
]
107623549
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107623549
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107623549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
VWA
VWA_3
UBA_7
Tfb4
Motif
Other DBs
NCBI-GeneID:
107623549
NCBI-ProteinID:
XP_020968464
LinkDB
All DBs
Position
B10:131059358..131065207
Genome browser
AA seq
372 aa
AA seq
DB search
MNNTVKRPLNGGVEDDDEDEADGADLEAWERTYAEDRSWESLQEDESGLLRPIDTTAIHH
AQYRRRLRALASTAATARIQKGLIRYLYIVVDLSKAASETDLKPSRMAVIGRQVEAFIRE
FFDQNPLSHIGLVTIKDGIAHCLTELGGSPESHIKALMGKLECSGDASLQNALELVLGYL
NQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFICKHLSQETG
GTYSVALDESHLKELVLEHAPPPPAIAEYATANLIKMGFPQRAAESAVAICTCHEEARTG
GGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSQTSQNGSSHNF
SSDCFGCQCLLR
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaataatactgttaaaagaccacttaacggaggggtagaagacgatgatgaggatgaa
gctgatggtgcagaccttgaagcctgggagagaacttatgcagaagatagatcatgggag
tctttgcaagaggatgaatctggacttcttcgccccatagatactacagccattcaccat
gcccagtatcgcagacggcttcgtgcccttgcttccacagcagctactgctcgaattcag
aagggtcttatccgttacctatacattgttgttgacctgtccaaggcagcttcggagaca
gatttaaaaccaagtaggatggctgtgattggaagacaggttgaggcatttatcagggag
ttctttgatcagaatccacttagtcatattggtctggtgaccataaaagatgggattgca
cattgtttaacagaacttggaggcagtcctgagtcccacattaaagctttgatgggtaaa
ctggaatgctcaggtgatgcttccctgcaaaacgcactagagcttgttcttggctatcta
aaccaaattccatcatatggccatcgagaagttctgatcttatattcagctcttagtacg
tgtgatcctggtgacctcatggaaaccatccagaaatgcaaaaagagtaaaataaggtgt
tctgtcattggccttgctgctgaaatgttcatatgcaaacatctcagccaagaaactgga
ggaacttactctgttgcactagatgagtcccacctgaaagagttagttctggagcatgct
ccaccacctccagcaatagcagagtatgctactgctaatctaattaagatgggttttcca
caaagagccgccgagagtgctgttgctatttgtacatgtcatgaagaggctaggacagga
ggaggttacacttgtccaagatgcaaagttcgtgtttgtgagctaccaactgaatgtcgc
atctgtggattgacgcttatctcttcaccccatttggcaaggtcatatcatcatcttttt
ccaatagtgccatttgatgaggtctctcaaacatctcaaaatggtagtagtcacaatttt
tccagtgattgttttggctgtcaatgtctccttaggtag
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