Arachis ipaensis: 107623632
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Entry
107623632 CDS
T04301
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
aip
Arachis ipaensis
Pathway
aip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107623632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107623632
04121 Ubiquitin system [BR:
aip04121
]
107623632
03036 Chromosome and associated proteins [BR:
aip03036
]
107623632
03400 DNA repair and recombination proteins [BR:
aip03400
]
107623632
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107623632
Ubiquitin system [BR:
aip04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107623632
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107623632
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
107623632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_2
zf-HC5HC2H
BRCT
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-HC5HC2H_2
zf-RING_6
zf-RING_5
RTT107_BRCT_5
zf-RING_10
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
107623632
NCBI-ProteinID:
XP_016181457
LinkDB
All DBs
Position
B10:complement(1898560..1903683)
Genome browser
AA seq
987 aa
AA seq
DB search
MANRTDLEEMGRELQCPICLSLLNSPASLPCSHVFCNFCIVKSMKSSSDCPVCKIPFFPR
EVRPSPRSLNLVNIYKRMERSSGMNLFLTQNPHHSKFSDEETQCQTDADCVREDATRSHR
NPAQKRKTLKNSVSGKENVPDTAKPSLPAKKRVQVPQDPLSETPFKNLSSGDSLYGTRKE
GKEKDTDTANENPLQSERDVPVLSPFFWLREEEGVENLSQQTFGDKLIDESPTPSPPSFS
DLKDSDDENPTKLTSDEVQNKTSFDLFDSELFEWTQRPCSPELFSSPVKLQPLSAGVISE
NQEDLLDASKELERNKSSDYAENTKLQNSENETRLSDVLQPSVTSPFRSSGDINGAKKYK
KRSRKMREKAAQEQVVEQQDSIEGINVDSNRSLEITEDQSREKQQASNLGKTNLKCKRVC
FDTRTDSNISVVFRNGEVNMAKDSYISHSQKETNKLACQMIPGKCQSKRSGKQKLNYVQD
QAEELSCMQNQTDDELAGSASSMLSQQTDKNGKMSNKRQIKGKVFRKSISCGSELRSTKK
LKLSSDFISQTKVGEQIQPNESTQRCPGVKVLDDTSKEKCSTWMHVPVLPNCESQAEKYQ
CVFCHSSEESEVSGPMMHYYGTKPVDANYEGGSKVIHSHRNCTEWAPNVYFEDDNAINLE
AEISRSRRIKCGFCGLKGAALGCYEKSCRRSFHVPCAKWTTHCRWDMENFVMLCPLHTSC
ILPCESSGSKGKSNKCRTRDSKSLAFKHGPTNQKGTALGSYKKIVLCCSALSIQERDIVS
EFQRVTKVTVLKKWDSSVTHVIASTDENKACKRTLKVLMGILEGKWILNIEWIKACMKEM
KPVDEESYEINLDIHGIHDGPHLGRLRVLNKQPKLFDGFKFYFVGDFMPSYKGYLQDLVT
AAGGVILNRKPVSGDANSTSPGMHPPQTLIIYNLELPDKCSPSKRDTISTQRRHDAEVLA
SSTGSKIASNTWILNSIAACKLQILAE
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgtacggatctggaggaaatgggcagagaactccagtgccccatttgttta
agtttgctgaattctccggccagtcttccatgcagccatgtcttctgcaacttttgtatc
gtcaagtctatgaagtcgtcttctgattgccctgtctgtaaaatacccttcttccctcga
gaggttcgccctagtcctcgttcgctcaacttggtcaacatttacaaaagaatggaacgc
tcttctggtatgaacttattcctcacccagaatccgcaccactctaagttttcagatgaa
gaaacgcaatgtcaaactgatgctgactgtgttagagaggatgctactcgaagtcatcga
aatcctgctcagaaaaggaaaaccctcaaaaacagcgtgtcagggaaggagaatgttcct
gacactgcaaaaccttctcttccagctaagaaaagggttcaggtgccacaagatcctctt
tctgaaactccattcaaaaatttaagctctggagactccctctatggaactagaaaagag
ggaaaagaaaaggatactgatactgcaaatgaaaaccctctccaaagtgaaagagatgta
cctgttctttcacctttcttttggttaagagaggaggaaggtgttgagaatttaagtcag
caaacttttggagataagcttatagatgaaagcccaacaccaagccctccttcattcagt
gatctcaaggactctgatgatgaaaatccgactaaactgacatcagatgaggtgcaaaat
aaaacctcttttgatctctttgatagtgagctgtttgagtggacacaaaggccttgctct
cctgaattattttcaagtcctgtcaaattgcagcctttgagtgctggtgtgatcagtgaa
aatcaagaggatttgctggatgcctcaaaagagcttgaaagaaataaatccagtgattat
gctgaaaatactaaacttcagaattcagaaaacgaaactagattgtctgatgtgctacaa
cccagtgtgacttctccatttaggagttctggtgatataaatggggcaaagaagtacaag
aagagaagcaggaagatgagggaaaaagctgctcaagaacaggttgtggaacaacaagat
tcaattgagggaatcaatgttgattcaaatagatcattagaaatcactgaggatcaatca
cgggagaagcaacaagcttctaatctgggaaagactaatttaaagtgcaagagggtttgt
tttgatactcgtaccgactccaatatatcagtagtttttcgtaatggtgaagtgaacatg
gcaaaggattcatatatttcacattcccaaaaagaaaccaacaagcttgcttgccaaatg
attccaggtaaatgccagagtaaaagatctggaaagcaaaagctgaattatgtgcaggac
caagctgaagaattatcttgcatgcaaaatcaaactgatgatgaattagctggttctgca
tcatctatgttaagtcagcagacagacaaaaatggaaagatgtccaataaaaggcaaatt
aaagggaaagttttcagaaagtctatttcttgcggtagtgaattgaggagtaccaagaaa
ttgaaactttcctccgattttatctctcagacaaaggttggtgaacaaatccaacctaat
gaaagtacccagaggtgtccgggtgtcaaggttttggatgatacatctaaggagaaatgt
agcacttggatgcatgtaccagttttaccgaactgtgaaagtcaagctgaaaagtatcaa
tgtgttttttgtcactcatcagaagaatcagaggtttctgggccaatgatgcattactat
ggcaccaagcctgttgatgcaaattatgagggaggatccaaagtcatacattctcacagg
aactgcacagaatgggcccccaatgtatattttgaagatgataatgcaattaatcttgaa
gctgaaataagtaggagccggagaattaagtgtggtttttgtggactcaagggcgctgct
cttggttgttacgagaaaagttgtcgtaggagctttcatgttccttgtgccaagtggact
acccattgccgatgggatatggaaaactttgtcatgttatgccctttacatacgtcgtgc
attttaccctgtgagagttcaggatccaagggtaagagcaataagtgcagaacgagagac
agtaaaagccttgctttcaaacatggccctacaaatcagaaagggactgctcttggatca
tacaagaaaattgtgctttgttgctcagctctgtcaatacaggagagggatattgtttct
gaatttcaaagagtaaccaaggttactgttttgaaaaaatgggattcaagtgttacccat
gttatagcatcaacagacgaaaataaggcatgtaaaaggaccctcaaagtattgatgggc
atactggaggggaagtggattctcaatattgaatggattaaagcttgcatgaaggaaatg
aagcctgttgacgaggagagttatgaaatcaatcttgacatccatggaatccatgatggt
cctcatcttggaagactaagagttttaaataagcaaccgaagcttttcgatggcttcaag
ttctattttgtgggagattttatgccatcatacaagggctatttgcaagatcttgtgacc
gctgctggaggggtaattttgaatagaaaaccagtgtctggtgacgcaaactcaacgtca
cctggtatgcatccaccccagacactcataatttacaaccttgagcttcctgataaatgc
agtccttccaaaagggataccatttctactcaacggagacatgatgcggaggttctagca
agctctacaggttcaaagatagcaagtaatacatggattctgaactctattgcagcctgc
aagctgcaaatccttgctgaatga
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