Arachis ipaensis: 107623739
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Entry
107623739 CDS
T04301
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aip03041
]
107623739
Spliceosome [BR:
aip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107623739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_3
Suf
Crl
Motif
Other DBs
NCBI-GeneID:
107623739
NCBI-ProteinID:
XP_016181584
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All DBs
Position
B10:135829557..135832532
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AA seq
689 aa
AA seq
DB search
MRKVSSAAEVEVKELNELPEEWRRARLAWLCKDLPAHKSTAVKILNGQRKWMRQEDATYL
AVHCMRIRENETAFRVYKWMMQQSWYRFDFALATKLADYLGRDRKFSKCREVFDDIINQG
RVPSESTFHILVVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRLSLHNSLFKALVSKPGM
LSKHYLRQAEFVYHQLVTSGFQVHKDIYGGLIWLHSYQDSVDRERVDEIREEMVRAGIEQ
GGEVLISILRVCAKGGDAEEAEKTWSKLLQLEIDPPPHAFVYKMEVYSKVGMPKKSLEIF
QEMQEKLETTSTAAYNKIIEILCKAQELESAESIMTEFLNSGLKPLTPSYISLLSMYYNL
ELHDKLEEAFFQCQEKCRHSCTVYSIYLDSLVKVGNLEKAENIFNQMNRDGSVGVNGRSC
NIILSGYLSSGNHLKAAKIYDFMCLKKYDIEAPLMEKLDHLLSLNRKVVKRPMSLKLTKE
QREILIGLLLGGLQIDSDDQRKNHIIRFDFKVNSSYHYVLKSHIHHQFYEWLHPSFKLSG
DIDNEKIPNKFCTIASSHFGFYAEQFWSKGQPTIPTLVHRWLSPCVLAYWYMYGGCRNSS
GDILLKIKGRREGVENIVRKFKAMSLDCKVKRKGRVFWIGFLGSNSASFWKLVEPYVLED
VRVFPEAGDHTLEGGSMENENINFNSDSD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggtgtcaagcgcggcggaggtggaggtgaaggagctgaatgagctgccggag
gagtggcggagggcgaggctggcgtggctgtgcaaggaccttccggcgcacaagtcgacg
gctgtgaagatactgaatgggcagaggaaatggatgaggcaggaagatgccacgtatctc
gccgtccattgcatgcgcattcgcgagaatgaaactgcttttagagtatacaagtggatg
atgcaacagagttggtaccgatttgattttgctcttgccactaagctagctgattacctg
ggtagagaccgaaagttttcaaagtgccgcgaggtatttgatgatattatcaatcaaggt
cgtgttcctagtgagtcaactttccatatattagttgttgcttatcttagtgctcctgtt
caaggttgtttggatgaagcatgcagcatttacaatcgtatgattcagttgggtggttac
cagcctcgtctcagcttgcataattccctcttcaaagctcttgtcagcaaacctgggatg
ctttcgaaacattaccttaggcaagctgagtttgtatatcatcaattggttacaagcggt
tttcaagtgcataaagatatttatggtggcttaatttggctgcatagttatcaggattcc
gtagatagagaaagggtagacgaaataagggaagagatggtacgtgccggaattgagcag
ggaggggaggtgctaatatccatcttgagggtttgtgcaaaggggggggatgcggaggaa
gctgagaagacttggtctaaacttcttcagcttgagattgatcccccgcctcatgcgttt
gtgtataaaatggaagtctactcaaaggttggcatgcctaagaagtctttggagatattt
caagagatgcaggagaaactagagacaacaagcactgcagcctataacaaaataatagag
atactatgcaaagcacaagaattggaatctgcggaatccattatgacagaatttttgaat
agtggtttgaagccactgacaccatcttatattagtttactaagcatgtactacaatttg
gaattacacgataaacttgaagaggcattcttccagtgccaggagaaatgtcgtcatagc
tgtactgtatacagtatatatttggattcattggtgaaggttggtaatcttgaaaaggct
gagaatatatttaaccaaatgaatcgtgatgggtctgttggtgttaatggccgatcatgc
aacattatcttgagtggatacctgtcctctggaaatcacttgaaggctgcaaagatctat
gacttcatgtgcctaaaaaagtacgatattgaagccccattgatggaaaagcttgaccat
ctcttgagcttgaataggaaagttgttaaaagaccaatgagcctgaagctaaccaaagag
cagagggaaatattaattgggttgcttttgggtggtttgcagattgattctgatgaccaa
aggaagaatcacattatccgtttcgattttaaggttaattctagctaccattatgtcctg
aagagtcatatacatcaccagttctatgagtggctgcatccttcttttaagctgagtggg
gacattgacaatgagaagataccaaacaagttttgtaccattgcaagctctcattttggc
ttctatgcagaacagttttggtcaaagggtcagccaacgattccaacacttgtccatagg
tggttgtcaccatgtgttcttgcatactggtacatgtatggaggctgtcgaaattcgtca
ggggatatcctgctgaagataaagggaaggcgcgagggggttgagaacattgtcagaaag
ttcaaagccatgtccttggactgtaaggtaaagaggaaagggagggtattttggattggt
tttctgggaagcaattcagcttccttctggaaattggttgaaccttatgttttagaagat
gtaagggtgtttcctgaagcaggtgaccacacattggaggggggttcaatggaaaatgag
aacattaatttcaatagtgattctgactga
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