Arachis ipaensis: 107623745
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Entry
107623745 CDS
T04301
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aip03036
]
107623745
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
107623745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_Aladin
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_EML
NBCH_WD40
Tricorn_2nd
Ctf4_C
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WD_LRWD1
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_ELP1_1st
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
107623745
NCBI-ProteinID:
XP_016181590
LinkDB
All DBs
Position
B10:complement(120825489..120830147)
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AA seq
808 aa
AA seq
DB search
MKIRSVKLREAHANKGGRPSFCSVLWDQQARHLVTAASSDICVALHDPLLPSSTPLRTLR
HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPAGEFETNITRFTLPIRSLAFNKSGSML
AAAGDDEGIKLINTIDGTIARVLKGHKGSVTGLAFDPNGEYLASLDSSGTVIFWELHSGR
ILHNLKNIAPDNGLDVSTMNVLSWSPDGEMLAVPGLRNDVVIYDRDTAEKLFSLRGDHAQ
PICYLGWSPNGKYMATSSLDKQVLIWDVDRKQDIDRQKFDERICCMAWKPIGNALAVIDV
MGKYGIWESVIPSSMKSPTEDIPESKKSNGLLFFEEDDEEVNSAGGSLSDLGENSNGESE
PPSRKRLRKQTLSEENLDIDDIGGDEIDLFPKVESHKKRNRSQKEKLDDVSVGYRSTVAT
SKSKMQEAFQPGSTPVQPGKRRFLCYNMLGSVTTVEHDGYSHIEIDFHDTGSAPRIPSMT
DHFGFTMAALNESGSVFANPCKGENNMSTLMYRPFSSWANNSEWSMRFEGEEVKVVALGD
AWVAAVTSFNYLRIFTEGGLQRHIISIDGPVVTASGFRDKLAVVTHASACLPSNDQVLEL
RVFNLLQGTQLLRGRLPITPGSSLSWFGFSEEGQLSSYDSKGVLRLYTSQFGGSWLPLFS
AAKEKIDENYWVVGLNTSKLYCVTCKKPETFPQVLPKPIFNVLNLSFPLASSDLGSEALE
NEFILNNMHLFEIQKRIEDMASAGLDTSSLDDEAFNYEAAQDRCILRLIASCCYGDKLVR
ATELVKLLTLEKSMNGAIKLVRCGSCIF
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccggtcggtgaagctaagggaggctcacgccaacaagggcggccgcccttcc
ttctgctccgtactgtgggaccagcaggctcgccaccttgtcaccgctgcctcctccgac
atctgcgtcgccctccacgaccccctccttccctcctccactcccctcaggaccctccgc
caccaccgtgacggtgtcaccgccctcgctcttagccccaattccacttgcctcgcttcc
ggatccatcgatcattccgtcaagctctacaaatttcccgctggagagttcgagactaat
atcaccaggtttactcttccaattcgttccttagcattcaacaaatctgggagcatgttg
gcagctgctggtgacgacgaaggaatcaagctcataaacacaattgatggaaccatagct
agagtcctcaaaggccacaaaggttctgttactggcttagcttttgaccccaatggcgag
tacttagcatccttggactcgtctggaaccgttattttctgggagcttcactctgggaga
atccttcataacctcaaaaacattgctcctgataacggtttagatgtttcgactatgaat
gttctcagctggagccctgatggtgagatgttggctgttccagggttgcgaaatgatgtg
gtgatatatgatagggacactgctgaaaagttgttttctttgagaggggatcacgcacaa
cctatttgttacttgggttggtcgcccaatggaaaatacatggctacatctagtttagac
aagcaggttcttatatgggatgttgataggaagcaagatattgatagacaaaaatttgat
gagaggatatgttgcatggcttggaagccaattgggaatgccttggctgttattgatgtt
atggggaagtatggtatctgggaatctgttatcccttcatctatgaagtctccaactgaa
gatatacctgagagcaagaaaagtaacgggcttcttttctttgaagaggatgatgaagaa
gtaaatagtgcaggtggaagcttgagtgatcttggtgaaaatagtaatggtgagtctgag
ccacctagcaggaaaagattgcgaaaacagacattgagtgaggagaatttggatattgat
gatattggtggtgatgagattgatttgtttcccaaggttgaatctcataagaaacgaaac
cgctctcaaaaggaaaaattggatgatgtgagtgtgggttatagaagcacagttgctaca
tctaaatcaaagatgcaggaggcatttcaaccgggatccactcctgtgcagccgggaaag
aggcgcttcttgtgctacaacatgcttggaagcgtaaccactgttgaacatgatggatac
tcccatattgagattgattttcatgatactggaagtgctccacgaattccatcaatgact
gatcattttggatttaccatggctgctttgaatgagagtggaagcgtctttgcaaatcct
tgcaagggggagaacaacatgagtactctcatgtatcgcccatttagtagctgggcaaat
aatagtgagtggtccatgcgctttgaaggggaagaagtgaaggtggttgcacttggtgat
gcttgggtggctgcagtaactagttttaactatcttcgcatctttactgagggtggtttg
cagaggcatattatttcaatagatgggccagtggttactgcatcaggtttcagggataag
cttgcagttgttacccatgcctctgcttgccttccctccaatgatcaggtgctagaattg
agagtatttaatctacttcaggggactcagcttcttcggggtcgattgccaataactcct
ggttcttctctaagttggtttgggtttagtgaagaaggccaattgagttcctatgattcc
aagggtgtgctaagattatacacaagccaatttggtggtagctggctcccgctcttcagt
gctgctaaggagaagattgatgaaaactattgggttgtggggttgaatacaagcaagtta
tattgtgtaacgtgcaaaaagcctgaaaccttcccacaggtgttgccaaagccaatcttc
aatgtactaaatctttcatttcctcttgcttcctctgatttgggatctgaagcccttgaa
aatgagttcatattgaacaacatgcatctgtttgagattcagaaaagaatagaagacatg
gctagtgctggcttggatactagttcacttgatgatgaagccttcaattatgaagcagca
caagatagatgtatccttaggcttatagcatcctgctgttatggtgataaacttgtgcgt
gcgactgaacttgtaaagcttttgacactagaaaaatcaatgaatggcgcaataaaactt
gtacgctgtggttcctgcattttttaa
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