KEGG   Arachis ipaensis: 107624198
Entry
107624198         CDS       T04301                                 
Name
(RefSeq) sm-like protein LSM8 isoform X1
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
aip  Arachis ipaensis
Pathway
aip03018  RNA degradation
aip03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107624198
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107624198
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aip03019]
    107624198
   03041 Spliceosome [BR:aip03041]
    107624198
Messenger RNA biogenesis [BR:aip03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107624198
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107624198
Spliceosome [BR:aip03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    107624198
SSDB
Motif
Pfam: LSM RimP_C
Other DBs
NCBI-GeneID: 107624198
NCBI-ProteinID: XP_016182166
LinkDB
Position
B10
AA seq 98 aa
MSDGPGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDSNLDLKNLRAHPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcagatgggcctggacttgagtctcttgttgatcaaacaatttcagtcatcacaaat
gacgggcggaatatagtaggaatcctgaagggttttgaccaggctacaaacattattctg
gatgagtctcacgaacgagtttattctaccaaggaaggtgtccagcaacttgttctaggc
ttgtacatcattaggggtgacaacataagcgttgttggtgaactagatgaagatttggat
tcaaacctggacttgaaaaaccttagagcacatcccttaaagcctgttattcactga

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