Arachis ipaensis: 107624198
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Entry
107624198 CDS
T04301
Name
(RefSeq) sm-like protein LSM8 isoform X1
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107624198
09123 Folding, sorting and degradation
03018 RNA degradation
107624198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107624198
03041 Spliceosome [BR:
aip03041
]
107624198
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107624198
mRNA degradation factors
5'-3' decay
Lsm complex
107624198
Spliceosome [BR:
aip03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107624198
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
107624198
NCBI-ProteinID:
XP_016182166
LinkDB
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Position
B10
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AA seq
98 aa
AA seq
DB search
MSDGPGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDSNLDLKNLRAHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgggcctggacttgagtctcttgttgatcaaacaatttcagtcatcacaaat
gacgggcggaatatagtaggaatcctgaagggttttgaccaggctacaaacattattctg
gatgagtctcacgaacgagtttattctaccaaggaaggtgtccagcaacttgttctaggc
ttgtacatcattaggggtgacaacataagcgttgttggtgaactagatgaagatttggat
tcaaacctggacttgaaaaaccttagagcacatcccttaaagcctgttattcactga
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