Arachis ipaensis: 107624343
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Entry
107624343 CDS
T04301
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
aip
Arachis ipaensis
Pathway
aip04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107624343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aip04131
]
107624343
Membrane trafficking [BR:
aip04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107624343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
Clathrin
ANAPC4_WD40
Beta-prop_WDR5
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40_Gbeta
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD40_Prp19
Beta-prop_THOC3
Beta-prop_Aladin
TPR_VPS8_2
zf_RING_Vps8
Beta-prop_TEP1_2nd
Beta-prop_HPS5
zf-RING_Vps41
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
107624343
NCBI-ProteinID:
XP_016182333
LinkDB
All DBs
Position
B02:6150650..6160324
Genome browser
AA seq
1935 aa
AA seq
DB search
MELDIHSFLPSDEEDDAADHHRRTVDDILNDCSSSSSSPSPPSSPSTSSSKPFHPLQNSQ
TTLPIPQSHLHQYNSARPASFSRVKPHDPFSNRVTRPPPFSSLLGGVRSNAKPGAALAAA
AAASRSVPTPHAAAIKSRRSLQKLAALGSGELSSSIGGIGDDSDVSSRSELGEGTSDRFE
GFESGVVEKFDELERKVEDFRDHSERSDGVGVVDTEVDVGANIGVENDSEKRDLDEVDNE
NDDSEKNVVSSAPFDHDDDDVDKENEKKIDATIITNVVVDDDLDVGEKRITEDGLKSEII
MVREEVVNDGAFVEESKSEVNDIVGDGDGDDGGSLVSDNVSELVEERLEELESKTAAKIA
EKKLESLKKPLELAEELEKKHASTGMHLEEGAAAQPMRLEGIRRGSTTLGYFDVDADNAV
TRAISSQAFRREHGSAQVLAAHANYIAVGMAKGLIVVVPSKYSIHHADSIDGKMLMLGMQ
GDRTHAPVTSMSFNQQGDLLLAGYGDGHVTIWDVQKGVVAKVISGEHTSPVVHAFFLGQD
PQNTRQFKAVTGDCKGLVLLHSISVVPLLNRFTIKTQCLLDGQKTGLVLSASPLLPDEYS
GSASPYSQGSTTAAASSISSMMGGVVGGDAPWKLFNEGSSLVEEGVVVFVTHQTALVVRL
SPTLQVYAQLSRPDGIREGSMPYTAWKYMAQTCSSAENTSADAVERVSLLAIAWERKVQV
AKLIKSELKVYGKWSLDSAAIGLAWLDDQMLVVLTSTGQMYLCAKDGTVIHQTSFGVDGI
GGDDLISYHTHFINIFGNPEKDYHNSVAVRGASIYILGPMHLVVSRLLPWKERILVLRKA
GDWMGALNMAMTLYDGHAHGVVDLPRTLDAVHEAIMPFLLELLTSYVDEVFSYISVAFCN
QIGKLDESSDSSSRSNSVHSEIKEQYTRVGGVAVEFCCHIKRTDILFDKIFSKFVDVNVQ
QRETFLELLEPYILKDMLGSLPPEIMQELVEHYSAKGWLQRVEQCVLHMDISSLDFNQVV
RLCREHGLYSALVYLFNKGLNDYRAPLEELFEVLQNSQKDSAVALGYRMLVYLKYCFTGL
AFPPGRGTIPPTRLQSLRKELVEFLLEDSNASKSQAKSNLVAKQPCLNVYLLLELDTEAT
LDVLRCAFDEDEISITGSSSLNSVDQSIEEAKEENGVTEHQSTLVQNTVDALVKLIDMKS
VSPDTTSTSGDDGLKWPLKDMGYLFEFIAYYVALQRAKISKDVLCQIFEYLTSERYSATN
VLVHGSTPKNREKQVLALLEILPDSDWDSSYVLELCERAQYHQVCGFIHSIRHEYVAALD
SYMKDFNEPVHAFSFINTMLSRLTNNDHATIRSDIISRIPELVELSRQGTFHMVISHFSD
ENSRIITELHSHPRSLFLYLKTLIELHLFGTLDLSNLRKGNLSNEKPVKDDSQVLSDYIE
NISNFPKYIRENPIHVPDDLIELYLELLCQYEGGSVLKFLEKFDSYRVEHCLRLCQQYGI
IDAAAFLLERVGDVGSALVLTLSDLNDKFVEVDDAVEAVVSKRSLRGSSHTEVFNAVLRM
KEVNDMLNLLRACIGLCQRNTPRLNPEEAEAHWFKLLDSFCEPFMDSNVEERAYERKHYF
GMLDGPENSLLDNESYKSRWKISKSRNGHIMRKLLSQFIKEIVEGMIGFVHLPTIMSKLL
SDNGTQEFGDFKFTILGMLGIYGFERRILDAAKSLIEDDTFYTMSLLKKGASHGYAPRTI
LCCICNGLLTKNSTSSGIRIFNCGHASHLHCEGLEIESSRKGSISGCPVCMPSQKPQQSR
NKSAIVDNGLISRFSTRRQPPRGSPIPPHENDLAENSYGHQQISRFEILNSLQKNERFIQ
IENLPQLRLAPPAVYHEKVNKVIDFHAGESSSSSSAVLEKQSRNNKQSRELRVKGSSIRF
PLKSTIFGKEKNNKR
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgacatccactccttcctcccttccgacgaagaagatgacgccgccgatcac
caccgccgcaccgtcgacgacatcctcaacgactgttcatcttcctcttcttctccctct
cctccttcttcgccttccacttcttcttctaaacccttccacccgctgcaaaattcccaa
actacccttccgatccctcaatctcatcttcatcagtataattcagcaagacccgcttcc
ttctctcgggtcaaacctcatgacccgttttccaaccgagtcacgcgcccgccgccgttt
tcctcgctgctgggcggtgttaggtctaatgccaagcctggagccgcgctggcggcggct
gcagcagcttctagatccgtcccgacgccgcatgccgcggcgattaagtcacggaggagt
ttgcagaagctcgcggcgttgggaagtggggaattgagtagttcgatcggtggaattggc
gatgattctgatgtttcttctagaagtgagttgggagaggggactagtgacagattcgag
gggtttgagtctggtgtggttgagaaattcgatgagttagaaaggaaagttgaggatttt
agggatcatagtgagcgtagcgatggtgttggtgttgttgatactgaggttgatgttggt
gctaacattggggtggagaatgattctgagaagagggatttagatgaggttgacaatgag
aatgatgattctgagaagaatgtagttagttctgcaccttttgaccatgatgatgatgat
gttgataaagagaacgagaagaaaattgatgcaactattattactaatgttgttgttgat
gatgatcttgatgttggtgagaagaggataactgaggatggattgaagagtgagatcatt
atggtaagagaagaggtagtgaatgatggtgcttttgtggaagagagtaagagtgaggtg
aatgatattgtaggtgatggtgatggtgatgatggtggtagtttggtaagtgataatgtt
agtgagttggttgaggagaggcttgaggagctggaaagtaaaacggctgctaagatagca
gagaagaaactagagtctttgaagaagccgcttgaattggcggaagaattggagaagaag
catgcttccactggtatgcatttggaagagggcgctgctgcgcagcctatgagactagag
ggcattaggaggggctccacaacacttggatatttcgatgttgatgcagataatgctgtc
actagggccatctcttcccaagcattcaggcgggaacatggttctgcacaagtgttggca
gctcatgccaattacattgcagtaggaatggccaagggactcattgttgtagtgccaagc
aagtattccattcatcatgctgacagcattgatggaaagatgttgatgcttggtatgcaa
ggtgatcgaacacatgctcctgtaacatccatgtctttcaaccagcaaggagaccttctt
ttagctggttatggggatggtcatgtcacaatttgggatgtacagaaaggtgtagtggca
aaagttattagtggagagcatacatcaccggtggtacatgcattttttcttggacaggat
cctcagaatactcgtcaatttaaagccgtcactggtgattgtaagggtctggttctctta
cacagtatctcagtggtccctttgcttaataggttcaccattaaaactcagtgtcttctt
gatgggcaaaaaacgggcttggtactgtcagcttcaccactccttcctgatgaatatagt
ggtagtgcgtcaccttattcccaggggagcaccacagccgcagccagcagtataagtagt
atgatgggaggtgttgttggaggagatgctccttggaaactcttcaacgaaggctcttct
ttggttgaagaaggtgtcgttgtatttgtcacacatcagactgctttggtggtacgacta
agtcctacattgcaagtttatgcccaactttctaggccagatggaattcgggagggttcc
atgccatataccgcatggaaatacatggcacaaacatgtagttctgctgaaaatacgtcg
gctgatgctgttgaaagagtatcgttgcttgcaattgcctgggaaaggaaggttcaggtt
gcgaaattgataaaatctgaattgaaagtatatggaaaatggtctcttgacagtgcagcc
ataggtctggcatggttagatgatcagatgctggtagttctcacttcaactggacaaatg
tatctatgtgccaaggatggaactgtgattcaccaaacaagctttggtgtagacggtatt
ggaggcgatgatctgatttcttatcatactcacttcatcaatatatttggaaaccctgag
aaagattatcataactctgttgctgtaagaggagcttctatttacatacttggtccgatg
catcttgttgtttcccgtcttcttccctggaaagaacgtattctagttttgcggaaagcg
ggtgactggatgggtgccttgaacatggcaatgactctttatgatggccatgctcatggg
gttgttgaccttcctagaaccttggacgcagtgcatgaggccataatgcccttcttgttg
gagttgcttacatcatatgttgatgaagtattctcctatatttcagtggccttctgcaat
caaattggaaaactggatgaatcgagtgattcaagtagcagaagtaattcggtgcattct
gagataaaggagcaatacacacgcgttggtggagttgctgttgaattctgttgtcatatc
aaacggacagacatcctttttgataaaattttctcgaagtttgtggatgttaatgttcaa
cagagagaaacatttttggagcttctggagccatatattttgaaggacatgcttggatct
ctaccaccggagattatgcaagaactggtagagcattatagtgctaaaggttggttacag
cgggttgagcaatgtgtacttcacatggatatttcatcattggattttaatcaggtggtc
agattatgccgggagcatggcctgtatagtgccctggtgtatctctttaataaaggacta
aatgactatagggcacctctggaggagctctttgaagtcttacaaaatagccaaaaggat
agtgctgttgcacttgggtacaggatgctggtttacctcaagtactgttttacaggtctt
gcttttccaccaggccgtggaactattcctcctacacgcttgcaatctcttagaaaggaa
cttgtagagtttttgttagaagactctaatgcttcgaaatcacaggcaaaatcaaactta
gttgcaaaacaaccctgtctgaatgtatatcttctcttagagttggacactgaagctaca
ttagatgtccttagatgtgcgtttgatgaagatgaaatttcaattactggttcatcttca
ctgaactcggttgatcaatccattgaagaagcaaaagaggaaaatggtgttactgaacat
caaagtactttggttcagaacacagtagatgctcttgttaaattaattgatatgaaatct
gtttcaccagacacgacctctaccagtggtgatgatgggttgaagtggccattgaaggac
atgggttatctgtttgagttcattgcctattatgtcgctctccaaagagctaaaatctca
aaggatgtactgtgtcaaatatttgaatatttgacatcagagaggtactctgcaacaaat
gtcttggttcatggttcaactccaaaaaatagagagaaacaagtgcttgcacttttggaa
atactgcctgattcagactgggattcatcatatgtactagaactttgtgagagagctcaa
tatcaccaagtttgtggatttattcattccattagacatgagtatgtggctgcactggat
agttacatgaaagattttaatgagcctgttcatgctttctcctttatcaacacaatgctc
tcacggttgactaacaacgaccatgctactattcgatcagacatcatatctcgaattcct
gagttggttgaactaagcaggcagggcacatttcatatggttatcagtcattttagtgat
gaaaattctcgtatcatcactgaacttcactctcatccaagaagtctgttcctttattta
aagacactcattgagcttcacttgtttggtaccctagacttgtctaatttgagaaagggt
aatctttctaatgaaaagccagttaaggatgactcacaagtactaagtgattatatagaa
aatatatctaatttccccaaatacattcgtgaaaatcctatccatgtaccggatgatctg
attgagctttacctagagttactatgccagtatgaaggtggttcagttctcaagtttctt
gaaaagtttgatagctatcgcgtggaacattgtttacgcctatgccaacaatatggcatt
atagatgctgctgcattcttactagaaagagttggtgatgtgggtagcgctcttgtactt
acgctctctgatttgaatgataagtttgttgaagttgatgatgctgtggaagctgtagtc
tcaaaacgttccttacgtggttcttcccatacagaagttttcaacgctgtcttaagaatg
aaagaggtaaatgacatgctcaatttactacgtgcctgtattggtctgtgtcagcggaac
acccctcgactaaatcctgaggaggcagaagctcattggtttaaactacttgactcattt
tgtgagccatttatggattcaaatgttgaagagagagcatatgaaagaaaacattatttt
gggatgctagatggaccggaaaattcactactggataatgaaagctataagagcagatgg
aaaatctctaagtctcgtaatggtcatataatgagaaaactgctaagccagtttatcaaa
gaaattgttgagggaatgatcggttttgttcaccttccaactatcatgtctaaactgctt
tctgataatggaactcaagaatttggggatttcaaatttaccatattgggcatgctggga
atatacggcttcgaaagaagaattctggatgccgcgaaatccttgatagaggatgataca
ttttatactatgagtttactcaagaaaggggcctctcacggatatgctccgaggactata
ctgtgctgtatttgcaatggcctgcttacgaagaactccactagctctggaattcgaatt
ttcaactgcggtcatgcaagtcatctacactgcgaaggtttagaaatcgagtcatcaaga
aaaggatctatatctggatgcccggtatgcatgcctagccagaaaccccagcagtctaga
aacaaatcagccatcgttgacaatggcttgatcagcagattctctacaagacgccaaccc
ccacgtggaagccccattcctccgcatgaaaatgatttagcagagaattcttatggacat
caacagatatcacggtttgagatcttgaacagcttgcagaaaaatgagagatttattcag
atagaaaacttgcctcaattgaggcttgccccacctgctgtataccatgaaaaggtaaat
aaggtgatagattttcatgccggggaaagtagcagtagtagttctgcagttttggagaaa
caaagtagaaacaacaagcaaagccgggagctaagagttaagggttcatcaatcagattt
cccttaaaatcaactatatttggcaaggagaagaataataagaggtga
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integrated database retrieval system
