Arachis ipaensis: 107625224
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Entry
107625224 CDS
T04301
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
aip
Arachis ipaensis
Pathway
aip04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107625224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aip04121
]
107625224
Enzymes [BR:
aip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107625224
Ubiquitin system [BR:
aip04121
]
Ubiquitin ligases (E3)
HECT type E3
107625224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TRIP12_N
HECT
Arm
ARM_ARMC5
HEAT_2
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
107625224
NCBI-ProteinID:
XP_016183293
LinkDB
All DBs
Position
B02:complement(32881488..32891975)
Genome browser
AA seq
1559 aa
AA seq
DB search
MESRGQKRPEMVDELPADKRACSSLDFRPSSSNSSVQTHMNSTHSTLEAHDHDMDTSSSA
SASSRSEGEHEKDSAYGSCDSDEMDQHHSSLRDYQRRRMSSDHGKFKSIISSLSGQTEPS
GQLAVLTELCEVLSFCTEGSLSSMTSDLLSPLLVKLAKHESNPDIMLFAIRAITYICDLY
PRSAAFLVRHDAVPALCQRLLAIEYQDVAEQCLQALEKISREQPLACLQAGAIMAVLNYI
DFFSTSIQRVALCTVVNICKKLPSESPSPFMEAVPILCNLLQYEDRQLVENVATCLIKIV
ERVAQSPEMLDELCQHGLIQQVTHLLSINGRTTLSKLIYNGLIGMLVKLTSGSVLAFRTS
YELNISSILRDILATSDLSHGLPTSHVIVGHCNQVYEVLKLLNELLPGITKDENDQQVQD
KESFLANHPDLLQKLGTDVIPMLIQVFNSGASLYVCHGCLSVMYKIITLSKSDMLVELLK
KSSISSFLAGVFTRKDHHMLMLALQISETILQNFSDIFLKLFIKEGVFFAIDALLTPERS
TQLMYPVYSGIQLSVDSSQKFTSREALRCLCYAFSTSQSPTPSEGGHCKLDKDSVHNLAQ
NIKTKYLAPELYDSEKGLTDILQQLRAYSNDLLSMSADNSVCAQNEEKVNSILLSQIMDK
LTGKEQVSTFEFIESGVVRSLVNYLSQGHYVSENDGKGIVGGNYAAIEKRFEALARVCLH
GSRPFSSDTALPILIRNLQNALTSLEAFPIVLSNGPKLRHSYAAVPSGCSIPYPSLKVRF
VRAEGETWLNDCTEDFLTVDPFSSLHSIEGYLWPKVSKKSRKQEKSVSSHIVLQPESPPL
QSTSNASSCPAEIPVILGPGDMSTDLPETQGEEPKLSHPDETAKVNAGESSSSGTQGSVE
KELQSNAEPDSKLARQHLASCSNEAAQKLNFYLDEQYLDHQLTLYQAILHQIVKQNDCSS
GSKLWSQVHIITYRKAVESKDILPTECLPSPQDLSHDEVLAYYQQTPFFSDIFSCELVSD
LHRPSPTYDVLFLLKCLESMNRFMFHLMSRERICAFAEGKVDNLDSLNISVPSVPQNDFV
SSKLTEKLETQMRDSLAICPGSMPSWCNQLITSCPFLFSFEARCKYFKMKAFGQPQIQPH
MSYNSSGAESDRRPSLGGLPRKKILVYRNRILESAAQMMDQHARNKVVLEVEYDEEVGTG
LGPTLEFYTLVCRELQKSGLGMWRDDPCSFALKSNLQVEEMGINSLYGLFPRPWSSTLDT
SNGIQFSEVTKKFFLLGQVIAKALQDGRVLDLHFSKAFYKLILGKELSLYDIQSLDPGLG
RVLQEFQALINRKKFLEYFNGGNELEYGLSFRETRIEDLCLDFSLPGYPDIVLASGHDHT
MVNLTNLENYVSLVVDATVRSGISRQVEAFKSGFNQVFSVEHLKIFNEQELERMLCGEHD
CWAQINELADHIKFDHGYTASSPPIVNLLEIIQEFDHEQRRSFLQFVTGAPRLPPGGLAS
LNPKLTIVRKHCSNRADSDLPSVMTCANYLKLPPYSSKERMKEKLLYAITEGQGSFHLS
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtcgagggcaaaagcgtccagaaatggtggatgaacttcctgcggataagcgg
gcatgcagttcactggattttagacctagttcttcaaattcctcagtgcaaacccatatg
aattcaacccactcgacattggaggcccatgatcatgacatggacacttcttcgtctgca
tcggcttcaagccgatcagagggagagcatgagaaagattcggcttatggttcgtgtgac
tcggatgaaatggatcagcatcatagtagtctccgtgactatcagaggcggagaatgtca
agtgatcatgggaaatttaaaagcattatatcaagcttgagtggacaaactgaaccttcc
ggtcagttagctgtacttactgaactttgtgaagttttgtcgttttgtacagaaggttca
ctctccagcatgacttcggacttgttatcaccgctacttgtaaagctggcgaagcatgag
agcaatccagatataatgttgtttgctataagggccatcacttatatatgtgatctgtac
cctcggtcagccgcttttcttgttcgccatgatgctgtgcctgcattatgtcaaagattg
ttggctattgagtatcaagatgtagctgaacaatgtctccaagcattggagaaaatttcg
cgcgagcagccacttgcttgcctacaggctggggcgatcatggccgtcctcaattatatt
gacttcttttcgacgagcatacagagagtggctctgtgtactgtggtgaacatatgtaag
aagcttccttcagaaagcccttcacctttcatggaggctgtcccaatattatgcaatctt
cttcagtatgaggataggcagctggttgaaaatgttgctacctgcttgattaaaattgtg
gagcgagttgctcagtcccctgaaatgttggatgaactttgtcaacatggattgattcag
caggtcacacatctcttaagtattaatgggcggacgaccctatctaaattaatttataat
ggactgataggaatgcttgtgaaacttacttctggttcagttttagccttcaggacttca
tatgagcttaatattagcagcatattgagagatatattagctacatctgacctctcacat
ggattgccaacatcacatgttattgttggacattgtaatcaggtgtatgaagtactgaaa
ttgttaaatgaacttctccctggcattacaaaagatgagaatgatcaacaagtgcaagac
aaggaatcctttctagctaatcacccagatctcctccaaaaactagggactgatgtgatt
cccatgttgatccaggtgtttaattctggtgcgagtttatatgtttgccacggatgtcta
tcagttatgtacaagataattactctgagtaaatctgatatgcttgttgaattgcttaag
aaatccagtatttcaagttttttggctggagtgttcactcgaaaggatcaccatatgcta
atgttagccttacaaatttcggagaccatccttcagaacttttcagatattttcttaaag
ttgtttataaaggaaggtgtcttttttgctattgatgcactcttaacaccagaaagatct
acgcaattgatgtatccagtatatagtgggattcagttgtcagtggattccagtcaaaag
tttacttctagagaagctctgaggtgcctatgctatgcattttcgactagccaatctcct
actccttcagaaggtggacactgcaaacttgacaaggactctgttcataatcttgcacag
aatataaaaacaaaatacttagcaccagaattatatgattctgagaaaggattgactgat
attttgcagcaactaagagcatactctaatgatttattgagcatgtctgctgacaacagt
gtttgtgctcagaatgaagagaaggttaacagtatattattgtctcagattatggacaag
cttaccggcaaggaacaagtctctacttttgagtttattgagagtggagttgtgagatca
cttgtcaattatttatctcagggtcattatgtgagtgaaaatgatggaaaaggaattgtt
ggtggtaactatgctgccatagaaaaacgattcgaggccctggcaagggtatgtttacat
ggttctcgacctttctctagtgacacagcccttccaatattaatcaggaacctgcagaat
gcattgacttcattggaggcattccccattgttctaagcaatggaccgaaactgagacat
tcatatgctgctgttcctagtggatgttccattccttatcctagcctgaaagttcgtttt
gtcagggcagagggtgagacttggctgaatgactgtactgaagattttcttacagttgac
cctttttcttctttgcatagcattgaaggatatctttggcccaaggtcagcaagaaaagc
agaaagcaagaaaaatcagtatcaagccacatagtgttgcaaccggaaagtccacccctt
caatcaacatcaaatgcaagttcctgtccagctgaaattccggtaattttggggcctggt
gacatgtcaacagatctccctgaaacacagggagaagaaccaaagttatcacatccggat
gaaacagccaaagtgaatgctggagaatcatcttcctctggaactcagggatctgtagag
aaggaactgcaatccaatgcagaaccagactcaaaattggcaaggcagcatcttgcatct
tgtagcaacgaagctgctcaaaaactcaatttttaccttgatgaacagtatctggatcac
caattgactctctatcaggcaatccttcaccaaatagtaaaacaaaatgactgttcttct
ggttcaaaattgtggagtcaagtacatataataacgtatagaaaggctgtggaatccaag
gacatattgcctacagagtgtctgccttcacctcaggatttatctcatgatgaagtttta
gcttattatcagcagacacctttcttctcagacatcttctcttgtgaacttgtttccgat
ctccataggccaagtccaacttatgatgttttatttctgcttaaatgcttggagagcatg
aacagattcatgtttcaccttatgtctcgtgagagaatttgtgcttttgctgaagggaaa
gttgataacctagatagcctgaacatatcagttcctagtgtcccacaaaatgactttgtg
agcagtaagttgacagagaagctggaaacacagatgagggactctttggctatctgccct
ggtagtatgccatcatggtgtaatcagttaataacttcatgtccttttctgtttagtttt
gaggctagatgcaagtacttcaaaatgaaagcgtttggccagccccagatccaaccccat
atgtcttacaactcctctggagcagaaagtgacagacgaccaagtcttggtggattgcct
cgaaagaagattttagtttatcgtaaccggattcttgagtctgctgctcaaatgatggac
caacatgcccgcaataaagtggttcttgaagtagaatatgatgaagaagtgggcactggc
cttggaccaacattggaattttataccttggtatgccgtgagctacagaaatctgggctg
ggcatgtggagagatgatccttgttcctttgccctcaagtcaaatttacaggttgaggaa
atgggaatcaattctctttatggattgtttcctcgaccgtggtcatcaacacttgataca
tctaatggcatacagttctccgaagtaactaagaagtttttccttttaggccaagttatt
gctaaagcacttcaagatggaagggtcttagatctccacttctctaaagccttctataaa
cttatacttggaaaggaactttctctctatgacatccagtcacttgatccggggcttggt
agggtgttgcaagagtttcaagcactcattaaccggaaaaaattcctcgaatatttcaat
ggagggaatgaattggaatatggattaagcttccgggagaccagaattgaggatctctgt
cttgatttctcgcttcctgggtatcctgacatagttcttgcttcagggcatgatcacacc
atggtaaacttgacaaacctggagaattatgtttcgcttgttgtcgatgcaactgtgagg
tctggaatttcaagacaagtggaagcttttaaatctggctttaaccaggttttctccgtc
gaacatcttaagatttttaatgaacaagagctcgagcgcatgctttgtggagagcatgat
tgttgggctcagataaatgagctcgctgatcacattaaatttgatcatggatacactgct
agcagtcctcccattgttaatttgctggaaattattcaagagtttgatcatgaacagcgt
cgatcctttttgcaatttgtgactggtgcaccacggcttcctccaggaggattggcatct
ctcaatccgaagttaaccattgttcgaaagcattgtagcaaccgagcagactcggaccta
cctagtgtgatgacttgtgcaaattatcttaagctacctccatactcatcaaaagaaagg
atgaaagagaagctcttgtatgccattacagagggtcaaggatcgttccacctctcataa
DBGET
integrated database retrieval system
