Arachis ipaensis: 107625412
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Entry
107625412 CDS
T04301
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aip
Arachis ipaensis
Pathway
aip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107625412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aip03400
]
107625412
Enzymes [BR:
aip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107625412
DNA repair and recombination proteins [BR:
aip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107625412
SSDB
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Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
FANC_SAP
Motif
Other DBs
NCBI-GeneID:
107625412
NCBI-ProteinID:
XP_016183523
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Position
B02
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AA seq
533 aa
AA seq
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MKQFLQFLSTTSTNLNSFAVIQKHLNTKTLVSPTVKAMRSKRRFSNSSEPVLPVVENKKD
KKLKGLEASPVSKKYIAKESDVNSHSIEIERLRNDPAKMDTLTVEELRKTLRSIKVPAKG
RKDDLLSALKSFMDNNDSCELDPQAREEHEKRLLAASENTSMEVTTKKVFDEDPVDDVND
RRLKQSRSAKKTVKVANKKKLSVKSDDVSGCKPSREKRKVSSDIISVVAQSEEISTAIQT
EPWTLFAHKKPQKGWIAYNPRTMRPPPLTQDTKFVKILSWNVNGLRALLKLEGFSALARR
EDFDVLCLQETKLQEKDIKQIKQRLVDGYDNSFWTCSVSKLGYSGTSIISRIKPLSVRYG
LGVSDHDGEGRLVTAEFDTFYLICGYVPNSGDGLRRLTYRVTEWDASLSNYLKELEKSKP
VILTGDLNCAHEEIDIYNPAGNKRSAGFTDEERQSFATNFLSKGFVDTFRRQHPGVVGYT
YWGYRHGGRKTNKGWRLDYFLVSESIADKVHDSYIIPDVTGSDHCPIGLILKL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattcttgcaattcctgtctacaacctctaccaatctcaacagttttgcagtg
attcagaagcatttgaatacgaagacattggtttctcctactgtgaaagcaatgaggtct
aaaagacgtttttcgaattcatcagaacctgttttaccagttgttgagaacaagaaagat
aagaagcttaaggggttggaagcaagtccagtttccaaaaagtatattgcaaaggaaagt
gatgttaacagccattccattgagattgagaggttaaggaatgacccggccaaaatggac
acattgactgttgaggaactacggaaaacattgaggagtataaaggtccccgctaaaggt
cgtaaagatgatcttttgtctgccttgaagagtttcatggacaataatgactcttgcgag
ctagatcctcaagcacgagaagaacatgagaaaagactcttagctgcttcagaaaataca
tctatggaagtgacaactaagaaggtatttgatgaagaccctgttgatgatgtcaatgat
agaagattaaagcaatccagatctgcaaagaaaactgtcaaggtggcaaacaagaagaag
ttgtcagtgaaatcagatgatgtttcaggttgtaagccttctagagaaaagagaaaagta
tcttcagatatcattagtgttgttgcacaatcagaggagatcagtacagctattcaaact
gaaccatggacactttttgcacacaagaaaccacaaaaaggttggattgcatataatcct
agaactatgaggcccccgcctcttactcaggatacaaaatttgtcaagattttgtcatgg
aatgtcaatggattgagagcattgctaaaactagaaggattttctgcacttgctcgaagg
gaagacttcgatgtattgtgcttgcaagagactaaactgcaggagaaagatatcaagcaa
atcaaacagcgtctagtggatggctatgataacagcttttggacatgtagtgtttctaag
cttggttattctggaacatccataatctcaaggataaagccactttctgttagatatggc
cttggtgtatctgatcatgatggtgaggggagacttgtgactgcagagtttgatacattt
tacttgatatgtggatacgtccctaattctggagatggcttgagaagactgacatatagg
gtgactgaatgggatgcatctctcagcaattatttgaaagagcttgaaaaatcaaagcct
gtaattttgactggtgatctgaactgcgctcatgaagagattgacatatataaccctgct
ggtaacaaacgaagtgctgggtttacagatgaagagaggcaatcatttgcaacaaacttc
ttgtccaagggatttgtagatacttttagaaggcagcaccctggagttgttggatatact
tactggggttatcggcatggtgggcgcaagactaacaaagggtggcgtctagactatttc
cttgtatcagaatccatagctgacaaagttcatgactcgtacattatccctgatgttact
gggagtgatcattgtcctattggcctcattcttaagctttaa
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