Arachis ipaensis: 107625784
Help
Entry
107625784 CDS
T04301
Name
(RefSeq) transcription factor bHLH140
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
aip
Arachis ipaensis
Pathway
aip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107625784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aip03400
]
107625784
Enzymes [BR:
aip01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
107625784
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
107625784
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
107625784
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107625784
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
107625784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
AAA_33
Macro
zf-C2HE
HIT
AAA_18
AAA_16
AAA
KTI12
AAA_17
AAA_22
Zeta_toxin
Viral_helicase1
nSTAND3
POT1
MeaB
AAA_25
CPT
AAA_5
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
107625784
NCBI-ProteinID:
XP_016183983
LinkDB
All DBs
Position
B02:complement(94090701..94095047)
Genome browser
AA seq
744 aa
AA seq
DB search
MDMDVDEASRPKEGKTILVILVGAPGSGKSTFCEEVMRSSTRPWIRVCQDTIGNGKAGSK
AQCLSSAASALKDDKSVFIDRCNLDREQRSEFVKLGDVHKIDVHAVVLDLPAKLCISRSV
KRTGHEGNLQGGKAAAVVNRMLQKKELPKLSEGYSRITFCQSESDVKGAINTYGSLGPLD
NLPRGCFGQKNPDSKVQVGIMKFLKKVPAPDAAARPDGSGDTTSQNPGKNDYFHKDVEMA
SPILDNPNLESKEGESQEVAFDGSHASRVSLDDAPTLAFPSISTSDFQFNYEKAADIIVE
KVAEFTAKLGNARLVLVDLTHKSKILSLVKAKASEKHIDTQKFLTHVGDITKLHSTGGLN
CNVIANAANWRLKPGGGGVNAAIFNAAGPELESATKERAKSLSPGNAVVVPLPASSPLFV
TEGVTHVIHVLGPNMNPQRPNCLNNDYEKGCKILQDAYASLFEGFASITRTQAGQSREEN
ENIVKKALKLQDKSECHSRNNLTNIDQKTKRDADHGSEKSKKCKGIQDSFGVSSDSRDER
VDSEHRRNDGSMNKAWGSWAQALHQMAMHPEKHKNDLLEISEDVVVLNDLYPKAKKHVLI
LSRTRGVDCLEDVQKEHIQLLKKMHDVGLKWARKFLDENASLVFRLGYHSAPSMRQLHLH
VISQDFDSKHLKNKKHWNSFNTAFFRDSIDVMDEVSSHGKATLKDDDKLLSMELRCHRCR
SAHPNIPRLKSHIGSCKAPFPAXE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacgtcgacgaagcttctcgccccaaagagggaaagaccattttggtcatt
ttagtgggagcaccgggaagtggcaaatcaactttctgtgaagaagtgatgcgttcttca
actcgcccttggattcgcgtttgccaggataccattggaaatggtaaagcaggaagtaaa
gctcaatgtctgagcagtgcagctagtgcattgaaggatgataagagtgtgtttattgat
aggtgcaatcttgacagagagcagcgctccgaattcgtaaagctaggtgatgtgcacaaa
atcgatgtgcatgcagttgtgcttgatcttcctgctaaactttgtatttctcgatccgtt
aaacggactggccatgaaggaaaccttcagggtggaaaagctgcagcagttgtgaataga
atgcttcaaaagaaagagctgcccaaattaagcgaaggctatagccggataacattttgt
cagagtgagagtgatgtcaaaggtgccattaatacatacggctcacttgggccactggat
aacctcccacgtggctgctttggccagaaaaatccagattcaaaagttcaagttggtata
atgaagttcctcaaaaaggtgccagcccctgatgcagcagcaagacctgatggaagtgga
gacactacgtcccaaaatcctggaaaaaatgattatttccacaaagatgtagaaatggca
tccccaattctagataatcccaacttagagtcaaaggaaggagaaagccaggaagtggcc
ttcgatggttcccatgccagtcgagtttctctggatgatgctcccactctggcatttcca
tctatttcaacatctgatttccaattcaattatgaaaaggcagctgatattattgttgag
aaggttgcggagtttacagctaagcttggcaatgctagacttgtgctggttgatttgact
cataaatcaaagattctttccttagttaaagccaaagcatctgaaaaacacattgatacc
caaaagtttcttacccacgtcggtgacattactaaacttcattctacaggaggtttaaac
tgtaatgtcatagctaatgctgccaactggcggttaaaacctggtggtggaggtgttaat
gcagccatttttaacgctgcgggtcctgaactggagtctgcaaccaaagaaagagcaaaa
tctctttcacctggaaatgctgttgttgtccctctacctgcatcttctcctttgtttgtt
acagagggtgtaacccatgtcatacatgttcttggacctaatatgaaccctcaaagacca
aattgtcttaacaatgattatgaaaaaggatgcaaaattcttcaagatgcttatgcttcc
ctatttgaaggctttgcatcaattacgaggacccaggcagggcaatctagagaagaaaat
gaaaacattgtaaaaaaggctttgaaattgcaggataaatctgaatgtcattccagaaat
aatttgacaaatattgatcaaaagaccaagagagatgccgatcatgggtctgagaagagc
aaaaaatgtaagggaattcaggatagttttggagtgagctctgattctagagacgaaagg
gtagattcggagcatagaagaaatgatgggagcatgaataaggcatggggatcatgggca
caagctcttcatcaaatggctatgcatcctgagaagcataaaaatgacttgcttgagatt
tcagaggatgttgttgttctgaatgatctctatcctaaggcaaagaaacatgttctcatt
ttgtctcgtacccgaggagttgattgcctggaagatgtccagaaagaacacattcagttg
ctgaagaagatgcatgatgtgggtttaaagtgggccaggaagttcctagatgagaatgct
tcactggtctttcgccttggatatcactcagctccgtcaatgcgacaactgcatttacat
gttatcagccaggactttgattcaaaacatttgaagaacaagaagcactggaactcattc
aacactgctttctttcgcgactcgatagacgtaatggatgaggtctctagtcacgggaaa
gcaacactgaaagatgatgataagctgttgtccatggagttgaggtgccacagatgtaga
agtgcgcatccaaacataccccggttgaaatcgcatattggcagctgcaaagctcctttt
cctgcttntgaatga
DBGET
integrated database retrieval system