Arachis ipaensis: 107625970
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Entry
107625970 CDS
T04301
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
aip
Arachis ipaensis
Pathway
aip03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107625970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aip03400
]
107625970
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
107625970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
107625970
NCBI-ProteinID:
XP_016184209
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All DBs
Position
B02:complement(100438631..100443421)
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AA seq
687 aa
AA seq
DB search
MARNKEALVLLLDVGPSMHSVIPEIEKVCSMLVEKKLIFTKYDEVGVVLFGTEDTDNELT
EEVGGYQHVVVLKNIKVVEGDIVEALQQLPRGATHGDFLDAIIVGMDMLIKKFGETNKGK
KRLCLITNAQCPIKEPFEGTKEEQVTTIAKQMIVHGMRMESIILRGKLNQDANKKIMDEN
DQLLRIFSTETSARSTYVENPVSLLGALRTRNITPSTIFKGDLELSPKLRIKVLVYKKTA
EEKFPTLKKFSDKAASTDKFATHEVKVDYEYKSSQEPDKVVPPDQRIKGYRYGPQIVPIS
QAEWDAVKFKPEKGLKLLGFTDSSNVLRHQYMKDVNVFVAETGNTKATLALSSLARAMKE
MNKVAILRCVWRHGQANVVIGVLTPNLSDKENIPDSLYFNVLPFAEDVREFQFPSFSNFP
APIQPNEQQLEAAANLVKMLDLAPQGKEEVLLPDFTPNPVLERFYRYLELKSKHADAAVP
PLDDTLKKITEPDDELLQQNKSVIEKFRRSFELKENPRHKKSRRLLREERYGSSEENSKG
EIPALASNLIEDKSNVEVDNIGDLTPVQDFEAMFARRDNPDWVVKAIDAMKNKIHDLIED
SHEGDNNSKALECLAALRKGCINEQEPKQFNNFLRDLWSFCQEKNLHGFCDSLSSKGITL
IPKSEAADSEVTEDEARSFLVKSQPKV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaacaaggaagctttggttttgctgctggatgtggggccatccatgcactct
gttattcctgaaattgaaaaagtttgttccatgcttgtggaaaagaagctgatctttacc
aaatatgatgaagtgggtgttgtcttatttggaacagaagatactgataacgaacttacg
gaagaagttggaggatatcaacatgttgtggttttgaaaaatattaaagttgtggaggga
gatattgttgaggctctacagcaactgcctcgaggagctacacatggtgattttcttgat
gctattattgttggcatggatatgctgataaaaaagtttggagaaactaacaagggaaag
aagcgtctatgtcttattacaaatgcacaatgtccaataaaagagccatttgaaggaaca
aaagaggaacaagtgaccaccattgctaaacaaatgatcgtccatggtatgaggatggaa
agtataattctgagaggaaagcttaatcaagatgcaaataagaaaataatggacgagaac
gatcaactgttacgtattttttcaacagaaacttctgcaaggtcaacatatgtggagaat
ccagtttctttgcttggtgctcttagaacccgaaatataactccatccacaatctttaaa
ggggatcttgaattaagcccaaaactgaggattaaggttttggtatacaagaaaacagca
gaagaaaagtttccaactctcaagaaattttctgataaggctgcttcaaccgataaattt
gctacacatgaagtcaaagtggattatgaatacaagagttctcaagaacctgataaagtt
gtcccgccagatcaaagaattaaaggttatcgatatgggcctcaaatagttcccatatcc
caagctgagtgggatgctgttaagttcaaaccagaaaaaggtctgaagcttttaggattt
actgattcctccaatgtattgagacaccaatacatgaaagatgtcaatgtcttcgtagct
gaaacaggaaatacaaaagccacacttgcactttcttcgctagcaagggctatgaaggaa
atgaataaagtggcaatactacgttgtgtttggagacatggacaagcgaatgtcgtcatt
ggggtcctgacgcccaatctatctgataaggaaaatattcctgattcgttatacttcaat
gtactaccttttgctgaggatgtgcgagagtttcaattcccttctttcagtaatttccct
gcaccgatacagccaaatgaacaacagctagaggccgcggctaacttggtaaaaatgctt
gatcttgcaccacaaggaaaagaggaagttctgctacctgattttacaccaaatccagtc
ctagagcgcttttatcgctatcttgagctcaagtcaaagcatgcagatgctgcagtaccc
cctcttgatgatacgctcaagaaaatcacagaacctgatgatgagctccttcaacaaaac
aaatctgtgatagaaaaatttcgtcggtcttttgaactaaaggaaaatccgaggcataaa
aagtcaaggcgtttattgagagaggaaagatatggttccagtgaggaaaatagtaaagga
gaaatacctgctctggcttcgaatctcattgaagataagtcaaatgttgaagtcgacaac
attggagatctgactcctgtacaagattttgaagccatgtttgcgcgcagagataatcca
gattgggttgtaaaagcaattgatgctatgaaaaataaaattcatgatctcatagaggat
tcccacgaaggcgataacaattcgaaagcattggaatgtttagctgcgctccgcaaggga
tgtatcaatgagcaggaaccgaaacagttcaacaatttccttcgcgatctttggagtttc
tgtcaagagaagaaccttcatggtttctgtgattctctttcttcaaaaggaatcaccttg
atccccaaatcagaagctgcagacagtgaagttactgaagatgaagcaagaagtttctta
gtcaaatctcagccaaaagtttga
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