KEGG   Arachis ipaensis: 107626137
Entry
107626137         CDS       T04301                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
aip  Arachis ipaensis
Pathway
aip03018  RNA degradation
aip03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107626137
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107626137
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aip03019]
    107626137
   03041 Spliceosome [BR:aip03041]
    107626137
Messenger RNA biogenesis [BR:aip03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107626137
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107626137
Spliceosome [BR:aip03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    107626137
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 107626137
NCBI-ProteinID: XP_016184418
LinkDB
Position
B02:104067605..104069905
AA seq 150 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGRGRGRGREDGPGGRPAKGMGRGLDE
GGAKGPGGGRGRGGPGGKPGGNRGAGRGRG
NT seq 453 nt   +upstreamnt  +downstreamnt
atgctgcccctttctcttctgaagactgcccaaggccacccaatgttggtggagctgaaa
aatggagagacttataacgggcatttggtgaattgtgatacatggatgaacatccatcta
agagaagtcatttgtacctctaaagacggagatagattttggcgtatgccggaatgctac
attcgtggaaacacaatcaagtatcttcgagttcctgatgaggttattgacaaagttcag
gaagaaaccaagagccgtggagatcgcaaaccgcctggtgttggacgtggaaggggaagg
gggagagaggatggtcctggtggacggccagcaaaaggaatgggccgtggccttgatgaa
ggtggagctaaagggccaggaggaggccgaggcagggggggcccaggtggaaagcctggt
ggtaacagaggtgcagggagaggtagaggttga

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