Arachis ipaensis: 107626197
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Entry
107626197 CDS
T04301
Name
(RefSeq) rRNA biogenesis protein RRP5 isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aip03009
]
107626197
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
90S particles
Other 90S particles
107626197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
NRDE-2
UTP6_C
CvfB_2nd
HAT_Syf1_M
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
107626197
NCBI-ProteinID:
XP_020972174
LinkDB
All DBs
Position
B02:104818072..104835084
Genome browser
AA seq
1932 aa
AA seq
DB search
MAPNSKKWQKKKKNSNNKENKPRMDKSSKKISKPKREEQHDAATAKKKSEALALQLEDEV
PDFPRGREVPTKRKDDGDDREVFGYHEFGSDKRKKLNQWNRKKGKNTLRKRDEAADDWGT
LFGDTVTGKLPKRVNKITLGNITPGMKLWGAVAEVNEKDLVISLPGGLRGLVHCSDVVDP
IFDNEIEVGESFLSSVFSVGQLVSCVVVRLDHDNKDKGSRKIWLSLCLSLLHKNMNLDVV
QEGMVLDAYVKSIEDHGYILHFGLPSFTGFLPKNSLTGQGNEVKIGQLIQRLVKSVDKVR
KVVYLSSDPDIMSKSVTKDLKGISIDILVPGMMVNARVKSILENGVMLSFLTYFTGTVDL
FHLQTSYPTKNWKDLYSESQKVIARILFIDPSSRAVGLTLNPHLVHNKIPPFHVNIGDIY
DESKVVRVDRGAGLFLEVPSIPESAPAFVSIVDFDEEEIQKLEKKYKEGNHVRVRIQGLR
LLEGLAIGSLKPSALEESVFTHSDAMPGMVVKAKIVRVDGDHAIVQIPGGVKALCPLNHM
SELDITKPRKKFKVGAELVFRVLGRKKKMVTVTHKKTLVKSKLPIISSFTDATEGLITHG
WITKIEAHGCFVRFYNGVQGFAPRSELGLEPGVDPGAVYNVGQVVKCRVISSISALRRIN
LSFIIKPKRVAEEDKVRLGSLVSGVIDRITTNSVVVYVNASGFSWGTISLEHLADHLGQA
NLMKSGLKPGYSFDQLLVLDIKGSNLILSAKSSLIKSAQQIPSDISQMHLNSVVHGYICN
INEAGCFVRFLGSFTGLAPSKKAADDQKTNILEAYQIGQSVRSNVSEINTERGRVTLSLK
QTLCSSTDASFLQDYFIMDEKISKLQNMGYGASDLKWDEGFSFGAVAEGKVEDVKDVGIV
VSFEKYNDVFGFITTYQLAGTTLAKGSVVKAVVLDVAKAERLVDLTLKPEFVKRSEERSS
ISHSTKKKRRRESLKDLVLHQTVNAVVEIVKENYLVVSIPENNYIIGYASVSDYNTQRFP
QKKFLNGQSVVATVMAFPSPETSGRLLLLLNDANETSSSKRAKKRSIYNVGSLVEAEITE
IRSLELKVKFGIGLHGRVHISEVHDDVNDLENPFSCYKIGQTVTARIVAKPNEKHSYRKG
SQWELSVKPKIIAGSSDIGENESGNLDFEIGQCVAGYVYKVESEWVWLAISRNVSAQLHV
LDSAFEPRELQDFQNRFHVGQLVSGYVVSINLDKKLMRLIQRPLSTLPCRTSDEPQNNVV
HAELTMYIHEGDILGGRISKILSGVGGLLVQIGPYIYGKVHFTELTDTWVPDPLSGYHEG
QFVKCVVLEVSQTVRGTVHVDLSLRSSRGMLSQDSEDVQSTGHDNGKCVEMIEDIHPDMV
VKGYVKNVTPKGCFISLSRKIDAKILLCNLSNEFVKDPEKEFPVGKLVVGRVISVEPPLN
RVEVTLRTSSGPRKSNFEILDLSKLQVGDVISGRIKRIEPYGLFITVDDTNMVGLCHISE
VSDDTIENIETEYRVGQHVNARVLKVDEVKQRISLGMKNSYMRDEYAHGIPSDQQSDEPL
ADRMTSMDLMTSSVPGTSDMEILDEIDQLPILSRAEERASIPPLDVSLDDLDKIDINNTN
RQSEEHSNDEGIIDEKKKRREKKKAKEEREKQIRAAEERLLEEDVPRTADEFEKLVRSSP
NSSFIWIKYMDFMISLADVEKARSIAERALRTINIREEDEKLNIWKAFFNLENKFGNPKE
EALMKVFQRALQYNDPKKVYLALLGLYERTEQQNLADELLNKMTKKFKHSCKVWLRRVQS
LLKQNQDGVQPVINRALLSLPRRKHIKFISQAAIQEFKIGVPDRGRSLFEGILREYPKRT
DLWSVYLDQEIQHKDADVIRALFERAITLSLPPKKMKFLFKKYLDYEKSQGDEERIESVK
QKAMEYVENTLA
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgaactcgaaaaaatggcagaagaagaagaagaacagcaacaacaaagagaac
aagccaagaatggataaatcgtctaagaaaatttctaaaccaaagagggaagagcaacac
gacgccgcaacggcgaagaagaagtcagaagctctagctttgcagctggaagatgaagtt
cctgatttccctcgaggcagagaagttccgacgaagcgaaaggatgatggagatgaccgt
gaagtgtttggttaccacgagttcggttccgataaaaggaagaagctgaatcagtggaat
aggaagaaagggaagaatacgctgaggaagagagatgaagctgcagatgattggggcacg
ctcttcggcgatactgtcaccgggaaattgccgaagcgcgtcaataaaatcactcttggg
aatataactccaggaatgaagctttggggagctgttgctgaagtaaatgagaaagacctt
gtaattagtttaccagggggattacgtggtttagttcattgttcagatgtggtggatcct
atttttgataatgaaatcgaggttggggaaagcttcctttctagtgtattctctgttgga
cagctggtttcttgtgttgtagtaagattggaccatgacaacaaggataaaggaagtaga
aaaatttggctttctttgtgtctttctttgttgcacaagaacatgaacttagatgttgtt
caagaaggcatggttcttgatgcatatgtgaaaagcattgaagatcatggttacattctt
cactttggtctaccttctttcacaggattcttaccaaaaaatagcttgactggncaggga
aatgaggtaaaaattgggcaacttatacaacggttggttaagagtgttgataaagttcgt
aaggtggtttacttgagttctgacccagatataatgtccaaaagtgtgaccaaggatctt
aaaggtatatcaattgatattctagttccagggatgatggttaatgcacgtgtgaagtca
attcttgagaatggcgttatgttgtcatttctcacatacttcactggaactgttgatctg
tttcacttgcaaacaagctatcctacaaaaaactggaaggatttatacagtgaatctcag
aaggttattgctcgaattctatttattgatccatcaagtagagctgttggcttgacactt
aatccacatcttgttcataacaagattcctccctttcatgttaacattggagatatatat
gatgagtctaaagttgtcagggtagatagaggagccggattgttccttgaagttccttca
attccagagtcagctcctgcttttgtcagtattgttgattttgatgaggaagagatccaa
aagcttgagaaaaagtacaaggaaggtaatcatgttcgagttcgtattcagggattaagg
cttttggaaggacttgctataggaagtttgaagcctagtgctcttgaagaatctgtgttc
actcattctgatgcaatgccagggatggtagtgaaggctaagattgtcagggttgacggc
gatcatgctatagtgcaaattcctgggggtgtgaaggcactctgtcctcttaatcatatg
tctgaattagatattacaaagcctcgaaagaaattcaaggtgggagcggaattagtattt
cgtgtgcttggtcgcaaaaagaaaatggtgacggttacacacaaaaaaactcttgttaaa
tcgaaactgccgattattagttcatttacggatgcaactgagggtttgataactcatgga
tggataacaaagattgaagcccatggatgttttgtgcggttttacaatggggttcaagga
tttgctccgaggtctgaacttggattagagccaggagttgatcctggtgcagtttataat
gttggacaagttgtcaaatgccgtgtaataagctccatttctgctttacggaggatcaac
cttagtttcataataaagcccaaaagggttgcggaggaggataaggttaggttgggcagc
cttgtttctggagttattgacagaataacaacaaattctgtagttgtttatgtcaatgca
agtggtttttcgtggggtaccatatctttggaacacttggcagatcatcttgggcaagct
aatttgatgaaatctggattaaaacctggatatagttttgatcaactactggttctagat
attaaggggagcaatttgattctatctgccaaaagttcgcttattaaatctgctcagcag
attccttcagatattagtcagatgcatctgaactctgttgtgcatggctacatttgcaac
ataaatgaggctggctgctttgtccgtttccttggttcctttacaggtttggctccatcg
aaaaaggctgctgatgaccagaaaaccaatattctagaagcctatcagattgggcaatcc
gtccgcagtaatgtgtccgagatcaatactgaaagaggcagagtaacactctcactaaag
caaacattatgttcttctacagatgcatcctttcttcaagactactttattatggatgaa
aagatttctaagctgcaaaacatgggctatggtgcatctgatttgaagtgggatgaagga
tttagctttggtgcagttgctgaaggtaaagtcgaggatgttaaagatgtgggaattgtt
gtaagctttgagaagtataatgatgttttcggttttatcaccacttaccagttggcagga
actaccttggcgaaaggctctgttgtgaaagcagtggttcttgatgttgcgaaagcagaa
cggcttgtagatttaactctaaaaccagaattcgttaaaagatctgaagaaagaagctcc
ataagtcattccaccaaaaagaaacgtcgaagagagtcactgaaggacttggtgttgcat
cagacagtaaatgcagtagtggagattgtcaaagaaaactacttggtcgtatcaataccg
gagaataattacatcataggatatgcatccgtttctgactataatactcaaaggttcccc
cagaaaaagttcctaaatggacagagtgttgtggctactgttatggcttttccaagtcct
gaaacttcaggaaggttgcttttacttcttaatgatgctaacgagacatctagttccaaa
agagcgaagaaaaggtccatctataatgttgggtctctggttgaggcagagattactgaa
atcagatctcttgaacttaaagttaagttcggcattggtctacatggcagggtgcacata
tcggaggtacacgatgatgtaaatgatttagaaaatccgttttcctgctataaaataggg
caaacagtgacagcaagaattgttgcaaagcctaatgaaaaacatagctacagaaagggc
tcacagtgggagttgtcagtcaaacctaaaataattgcaggttccagtgacattggagaa
aatgaatctggtaatcttgactttgaaattgggcaatgtgttgctggttatgtatataaa
gtagaaagtgaatgggtctggttggcgatatctcgcaatgttagtgcccagctacatgtt
cttgatagtgcttttgaacccagagagcttcaagatttccagaatcgatttcatgttgga
caacttgtttctggttatgttgtgagtattaacttggacaagaaactaatgcggttaatt
caacgtcccttatctactctcccgtgcagaactagtgatgagccacaaaacaatgttgtg
catgcggaattaacaatgtatattcatgaaggagatattttaggcggtaggatttctaaa
atactttcaggtgttggtgggttgcttgtccaaattggtccatatatctatgggaaggtc
cactttactgagctcacagatacatgggtgcctgacccattatctggatatcatgaaggg
cagtttgtcaaatgtgtagttcttgaagtcagtcaaactgtcaggggtactgttcatgtt
gacttatcattacgttcttcaagagggatgctttctcaagattctgaagatgttcaaagc
actgggcatgataatggtaaatgtgtggagatgattgaagatattcatcctgatatggtt
gtaaagggttatgttaagaatgtcacaccaaaaggttgcttcatttcactttcacgaaag
attgatgcgaaaattcttctatgtaatttgtccaatgagtttgtcaaagatcctgagaaa
gaatttcctgttggaaagcttgtagttggcagggttatatccgtggagccccctttaaat
cgtgttgaagttacattgaggacatcaagtggtcccaggaaatccaattttgaaattctg
gatttgagtaaacttcaagttggagatgtaatatctggaaggattaagcgtattgagccg
tatggtttattcattacagttgatgacacaaacatggttggattgtgccatatatcagaa
gtttctgatgatactattgagaacattgaaacagagtatagagttggacagcatgtaaat
gcaagagtattgaaggtggatgaagtaaaacagagaatttctctgggaatgaagaattca
tatatgagagatgaatatgcacatggaataccttcagatcaacaatcagatgaacctctt
gctgatagaatgacatctatggatttgatgactagcagtgttcctggaacctctgatatg
gaaattttagatgaaattgatcaactcccaattctttcacgagcagaagaaagggcgtcc
attccaccattagatgtttcccttgatgacttagacaaaattgatataaataacaccaat
cgtcaaagtgaagagcattcgaatgatgaaggcataatagatgaaaagaaaaagaggcgc
gaaaagaaaaaagcaaaggaagaaagggagaaacagataagggctgcagaggaaagacta
ctggaggaggatgtaccaagaacagctgatgagtttgaaaagctggttagaagctctcct
aatagcagtttcatctggataaaatatatggacttcatgatttctttggctgatgttgag
aaagcccgctctattgctgaaagggctttgcggacaataaatattagagaagaggatgag
aagctcaacatctggaaggctttctttaatttagaaaataaatttggaaatcctaaagag
gaggctcttatgaaagtttttcaacgagctctgcagtacaatgatcccaaaaaagtatat
ctagcacttttgggactgtatgagaggactgaacaacaaaacttggctgatgaacttctc
aataaaatgacaaagaagttcaagcattcttgcaaggtttggttgagacgtgtacaaagt
cttttgaagcaaaaccaggatggagttcaacctgttatcaaccgtgctttgttaagccta
ccaaggcgcaagcatattaaatttatttctcaggcagctattcaagaattcaagattggg
gttcccgacagaggacgatcattgttcgaaggaattttacgggaatacccaaagagaaca
gacttgtggagtgtctatctagatcaagagatccaacacaaagatgcagatgtaattcgt
gcactttttgaaagggcaattactctgagcctaccaccaaagaaaatgaagtttttattt
aaaaaatatcttgattatgagaagtcccaaggtgatgaagaacgaattgaatccgtgaaa
cagaaggcaatggaatatgtcgagaatactctggcttga
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integrated database retrieval system
