Arachis ipaensis: 107626333
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Entry
107626333 CDS
T04301
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107626333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107626333
03012 Translation factors [BR:
aip03012
]
107626333
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107626333
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107626333
Translation factors [BR:
aip03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107626333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
T2SSE
BEX
Rad17
ABC_tran
ATPase
Motif
Other DBs
NCBI-GeneID:
107626333
NCBI-ProteinID:
XP_016184681
LinkDB
All DBs
Position
B02:106525828..106533728
Genome browser
AA seq
1032 aa
AA seq
DB search
MPHWILRAHNLSTYNQCFTSLHPHTPNLPLRISASVMSYRPNYQGGGRRGGGASSSGRRG
GGRGGGGGRGGGGGRGEQRWWDPVWRAERLRQQQPQKEVLDENEWWDKIEKMKRGGEQEM
VIKRYFSIADQQTVADMAYQHGLYFHAYNKGKTLVVSKVPLPDYRADLDERHGSTQKEIR
MSTDIERRVGNLLNNSQSVGEASASFPSVSTDLGQKQSLTATKSVSSQQSDSSKDKLDVA
LKERQEHIQASDGLKEMKAFRERLPAFKMKSEFLKAVQENQVLVVSGETGCGKTTQLPQF
ILEEEIGSLRGADCNIICTQPRRISAISVSARISAERGENLGETVGYQIRLETKRSAETR
LLFCTTGVLLRQLVQDPQLSGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLILMS
ATINADLFSKYFGNAPTIHIPGFTYPVEEHFLEDVLEKTRYSIKAEFDNFEGNSRRRRKQ
QDSKKDPLTEMFEDIDVDTHYKNYSVGVRKSLDAWSGSQIDLGLVEATIEYICRKEGDGA
ILVFLTGWDEISKLLDKLKVNNLLGDPNKCLILPLHGSMPTVNQREIFDRPPPNKRKIVL
ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG
VCYRLYPKLIHDAMPQYQLAEILRTPLQELCLHIKSLQLGAVASFLEKALQPPDPLAVQN
AIELLKTIGVLDDKEELTPLGRHLSTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRN
PFVLPINRKEEADDAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKQFCWDNFLSSVTL
RLIDDMRLQFLNLLSDIGFVDKSRGPNAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKR
TAFYTKEVGKVDIHPASVNAGVHLFPLPYMVYSEKVKTTSIYVRDSTNISDYALLLFGGN
LVPGKNGEGIEMLGGYLHFSASKSVIDLIRKLRGELDKLLNRKIEEPGLDITAEGKGVVA
AAVELLHSQTIR
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgcctcactggattctccgcgcccataacttgtccacttacaatcagtgcttcacttcc
ctgcacccgcacacacccaatcttcctctccggatctccgcttctgttatgtcttaccgt
cctaactaccaaggcggtggccgtcggggcggcggtgcttcctcttccggccgccgtgga
ggtggccgtggcggcggcggtggcagaggaggaggaggaggacgcggcgagcagaggtgg
tgggaccctgtctggcgagctgagcgcctcagacagcaacaacctcagaaggaggtgctt
gatgagaatgagtggtgggacaagatagagaagatgaagagaggaggggagcaggaaatg
gtcatcaagcgttactttagtattgcagaccagcaaaccgtagctgatatggcatatcag
catgggctgtacttccatgcttataataaagggaagactctagttgtaagcaaagttcct
ttgcctgattaccgtgcagatcttgacgagcgtcatggatcaacacagaaggagattaga
atgtccacagacattgaacgaagagtaggaaatcttttgaataactcacaatcagtgggg
gaagcgtctgctagttttccttctgtatccactgacttgggacagaaacaatcattaact
gctacgaaatctgtctcttcacaacagagtgattcttcaaaggataaacttgatgttgct
ctaaaggaaaggcaggaacatatccaggcaagtgatggtttgaaggaaatgaaggcgttt
agggagaggcttcctgcatttaaaatgaagtcagagtttctgaaagcagttcaggagaat
caggtattggtagtttcaggggagacaggttgtggcaaaacaacacagcttccacaattc
attctggaagaggaaataggatctttgcggggggctgattgcaacataatttgtactcaa
cctcggcgtatctctgcaatttcggtttcagctcgaatatctgctgaaagaggggagaat
cttggcgaaacagttggataccaaattcgtcttgaaacaaaacgttctgctgaaacacgc
cttcttttctgcaccactggtgtattacttcggcaattggtccaagatccacaattaagt
ggtgtcagccatttgctggttgatgaaattcatgaaagaggcatgaatgaagacttttta
attataattttacgcgatcttcttcctcggcgtccagatttgcgtctcattcttatgagt
gccactattaatgctgacttgttctccaaatactttggaaatgcaccaacaatacacata
ccggggtttacttatcctgtggaggagcacttcctagaagatgtgttggagaaaactcga
tatagcattaaggcagaatttgacaattttgaggggaactctaggaggagaaggaaacaa
caggattctaagaaggatccgttgactgaaatgtttgaggatattgatgtagatactcat
tacaaaaattatagcgtaggtgttagaaaatctcttgatgcttggtcaggttcacagatt
gatttgggtctggtagaggcaacaattgaatatatctgtcggaaagaaggtgacggagca
attcttgtatttcttactggctgggatgagatctctaagctacttgacaaacttaaagtt
aataacttgcttggtgatcctaacaagtgtttgatccttcctctgcatggctcaatgcct
actgtcaaccaacgtgaaatatttgaccgtcctccccctaacaagagaaaaattgtccta
gcaacaaatatcgccgagagtagcatcaccatagatgatgttgtgtatgtcatagactgt
ggtaaagcaaaggagaccagctatgatgctttaaataagctagcctgtctgttaccatcg
tggatttcaaaggcttcagctcatcagagacgtggccgtgcaggtagagtgcaacctgga
gtttgttatagattgtatccaaaactgatccacgatgcaatgccacagtatcagttagct
gaaatccttcgaacaccattgcaagagttgtgcctgcatatcaaaagtttgcagcttgga
gctgtggcgtcatttttagaaaaggcacttcagccaccagatcctctcgctgttcagaat
gctattgagcttctaaaaacgattggggttttggatgacaaggaagagcttaccccactg
ggtcggcatcttagcaccatacctttggacccaaatattggaaagatgcttctcatgggc
tctatctttcaatgccttaaccctgccttaacaattgctgcagctcttgcatatcgcaac
ccatttgtcttgcctattaacagaaaagaggaagctgatgatgcaaaacgatcgtttgct
ggtgattcttgcagtgatcacatagctcttctaaaggcatttgaaggatggaaggaggca
aaacgtagtgggaatgagaagcagttttgttgggacaattttctatcctcagtaaccttg
cggttgattgatgatatgagattacagtttctcaatttattatctgacatcggatttgtt
gacaagtccaggggtcctaatgcctacaaccagtacagtcatgatttggagatggtttgt
gcaatcctttgtgccgggctctaccctaatgttgttcagtgcaaaagaagaggaaaacgg
acggcgttctatacaaaagaagttgggaaggttgacatccatccagcttctgtcaatgcc
ggggttcatctcttccctttgccttacatggtatacagtgaaaaggtgaaaaccaccagt
atctatgttagagactctaccaacatttcagattatgccctgcttttgtttggtggtaat
cttgtccctggcaaaaatggcgagggcattgagatgcttggaggttaccttcatttctct
gcctcaaagagtgtcattgacttgataaggaaattacgtggagagcttgacaagcttctg
aacagaaaaattgaagaaccaggattggacattactgcagaaggaaagggagtggttgct
gctgctgttgagttgcttcacagtcaaaccattcgctga
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