Arachis ipaensis: 107626439
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Entry
107626439 CDS
T04301
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
aip
Arachis ipaensis
Pathway
aip03013
Nucleocytoplasmic transport
aip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107626439
03015 mRNA surveillance pathway
107626439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107626439
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107626439
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107626439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5815
Ribosomal_L38e
Motif
Other DBs
NCBI-GeneID:
107626439
NCBI-ProteinID:
XP_016184805
LinkDB
All DBs
Position
B02:108056486..108059520
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AA seq
434 aa
AA seq
DB search
IFKYDPEDSNIQAVTSGDTPYTSAATFEDLNLSPELLRGLYVEMRFQKPSKIQAISLPMI
LNPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPSVQAPQALCICPTRELAIQNTEVLRKMG
KHTGISSECAVPTDSRDSLPIQKREPIKAQVVIGTPGTIKKWISFKKLGVTRLKILVFDE
ADQMLAEDGFKDDSLRIMKEIEKFNSSCQVLLFSATFNDIVKNFVERTVKKDHNKLFVKK
EELSLDAVKQYKVRCPDELSKIEVIKDYIFELGENVGQTIIFVRTRQSAKMLHKSLVDMG
YEVTSIQGALDHEERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPIKHTAE
YTREFEPDYEVYLHRVGRAGRFGRKGAVFNLIYDEKDERLMSKIENHFGTRVSEVREKSV
EDYKAALKEAGLLQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
attttcaagtacgatccggaagactccaatatccaagcggttacttctggcgacacgccg
tacacctcggcggcgacgttcgaggacctgaacttgtcgccggagcttttgagaggactc
tacgttgagatgaggttccagaaaccgagcaagatccaagctataagcttgccgatgatc
ttgaatccgccgcatcgtgatttgatcgctcaggctcacaacggttccggcaagaccacg
tgctttgttttagggatgcttagtcgtgtggatccttcggtgcaagctcctcaagctctc
tgcatttgtccaacgagggagcttgctattcagaacactgaagttctccggaagatgggg
aagcacacagggattagctcggagtgtgccgttccgacagatagcagggattcacttcca
attcaaaaacgggagccaattaaggctcaggtggttattgggactcctggcaccataaag
aagtggatttctttcaagaaattgggtgtgaccagattgaagattcttgtctttgatgag
gctgatcaaatgcttgctgaggatggttttaaggatgattccttgaggataatgaaagaa
atagaaaaattcaattctagctgccaggttcttctattttctgccacattcaatgacatt
gtcaagaactttgttgagaggacagttaaaaaggaccataataaactttttgttaagaaa
gaagagctttctttagatgctgtgaaacagtataaagtgcgctgccctgatgagttgtcg
aagattgaggtgataaaagattacatattcgaattaggagaaaatgtgggccaaaccatc
atattcgtgcgcacgagacagagtgcaaaaatgctgcacaagtcacttgtcgatatgggt
tatgaggttacctcgatacaaggtgctcttgaccatgaagagagagacaaaattgtcaaa
gagttcagagatggtttgactcaagttcttatatccacggatgttcttgctcgaggcttt
gatcagcaacaggtcaatttggttatcaactatgatctcccaataaaacatactgcggag
tatacacgggaatttgagcctgattatgaggtgtacttgcacagagttggtagggctggt
cgatttggccgtaagggggctgtgtttaacctaatatatgatgaaaaagatgaaaggctg
atgtcaaagatcgagaaccattttggcacccgtgtatcagaggtacgagaaaaaagtgtt
gaagactataaagctgctcttaaggaagccggtttattacaatga
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