Arachis ipaensis: 107626695
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Entry
107626695 CDS
T04301
Name
(RefSeq) uncharacterized protein LOC107626695
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107626695
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107626695
5.6.2.5 RNA 5'-3' helicase
107626695
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107626695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
UvrD_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
107626695
NCBI-ProteinID:
XP_016185078
LinkDB
All DBs
Position
B02:complement(5996599..6003663)
Genome browser
AA seq
1376 aa
AA seq
DB search
MGSRGRPLFDLNEPPAEDNDERDGIICLQPQKTQPSTNPNSSDLFAASSAAQGIINNHAF
SHASSVSGFQPFVRPKSSSCIPDVDAVSKGAEEQDTNASSKSGKEDDLKVMDSRILSSAA
AQSTEREEGEWSDDEVSADVNGSHNLFQQIQVSQEQTTSGMVDGGGVASEWKSSNITSES
KSGNTKGPDSTIDEKSSRASVGLESNSTEQKSNIVPNSEGSIKSEASNDAPEEPSLIPKQ
KEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPMKSSTPRR
QNFSSPIITRTIKEVRNVPAQVERVGAAKDQKQVETSFAEGGIHADLHEPKSDSNGDNSG
PLGRSRRLNSETEPPAEVNLPPIPRKGSWKQPTDSRQQKNVLGSSRKLGQTGQSSNSNDV
KVGNKKHAPMKKQTPVSIQPQDTSVERLIREVTSEKFWHHPDRLRIIMLKPLLFEECRAQ
LYSTWEESMETVSRDTHFMVRVKANESRERGWYDVKLLPLPDFKWSFKEGDVAVLSSPRP
GSVSCQAVRSKQSSASLAQDDGEAEITGRVVGTVRRHIPIDTRDPRVAILHYYVGDSYDP
IRVDDDHIIRKLQIGSIWYLTILGSLATTQREYVALHAFRRLNSQMQTAILQPSPEHFPK
YEQQTPAMPECFTPNFVDHLRRTFNEPQLAAIQWAATHTAAGTSSGTTKRQEPWPFTLVQ
GPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQANEISSDNAPMGSIDEVLQ
NMNQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDS
QTRAAQAVSVERRTEQLLLKSEDEVLGWMHQLKNREAQLTQQLHCLHRELNATAAAVRSQ
GSVGVDPDVLMARDQSRDALLQNLAAVVEGRDKVLVEMSRLALLESRYRHGSAFNLDEAR
ASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLSLGAARC
VLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFY
QGRLTDSESVVKLPDEVYHKDPLLRPYIFYDIKHGRESHRGGSVSYQNIHEAQFCLRLYE
HLQKTLKSLGMGKISVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAFQGQERDV
IIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSDDWAALIADAKSRNC
YMEMDSLPKDFMVSKGPTYTPLPGKASSNMRGMRSGGQRFRGMEAYGDPRMGAPCEDDEK
MGAPASFRNGNHRSSRYPMENSLDDFDHMGDKSRDSWQYGAQKKQNSAGNGGKRDV
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgggttctagaggaaggccattatttgatctcaatgagccacctgcagaagataatgat
gagagggatggtattatttgtctccagccccaaaagactcagccatcaacaaatcctaac
tcttctgatttatttgcagcatcatctgctgcccaaggaataataaataatcatgctttt
tcacacgcatcatctgtctctggatttcaaccttttgttcggcctaaatcctcctcttgt
atccctgatgtagatgctgtatcgaagggagcagaagaacaagatacaaatgctagttct
aagtctggcaaagaggacgatttgaaagttatggattcacggatactaagttcagcagct
gctcaatccacagagagggaagaaggggaatggtctgatgacgaggtctctgccgatgta
aatggatctcataatttgttccaacaaattcaagtgtcacaagagcaaacaacatctgga
atggtggatgggggtggagtggcttctgaatggaagtctagcaatattacttctgaaagc
aagtctggtaatactaaaggtcctgatagtacaattgatgaaaagagtagccgtgcctct
gtaggtctagagtcaaattctactgaacagaagagcaacattgtcccaaattcagaaggc
agtataaaaagtgaagcttctaatgatgctccagaggagcccagtttgattcctaagcaa
aaagaagtgaaaggtattgaagctagtcatgctcttaggtgtgcaaataatcctgggaag
agaaagattgaccagcgcaaagaggaaatgttgggaaagaaacgaaatagacagactatg
tttcttaacttggaagatgtcaagcaggcaggtcctatgaaatcttcaacaccaagaagg
cagaatttttcatcgcctattataactcgtaccataaaggaggtccgtaatgttcctgca
caggttgagcgtgttggagcagctaaggatcagaaacaggttgagacatcttttgctgaa
ggtggcatccatgctgacttacatgaacctaaatctgattctaatggtgataattctgga
ccacttggtaggtctaggaggctaaacagtgagacggaacctccggcagaggttaattta
ccacccattccaagaaagggttcatggaaacaaccaacagattcaagacagcagaagaat
gtacttggttcaagtaggaagttgggacagactggtcaaagctccaactccaatgatgtc
aaggtgggaaacaaaaaacatgctcctatgaagaagcagactcctgtcagcatccagccc
caagacacatctgttgaacgccttatacgggaggttaccagtgaaaaattttggcaccac
ccagataggttgagaatcatcatgttgaaacctttactctttgaggaatgtcgggctcaa
ttatacagtacatgggaagaatcaatggagacagtatcaagggatactcattttatggtg
agagtaaaagcaaatgaatcaagagaaagaggatggtatgatgtgaaactacttccatta
cctgatttcaaatggtcatttaaggagggagatgttgcagtcctatcatctcctaggcct
ggatcagtttcatgtcaagcagtcaggtccaagcagagcagtgcatctttagctcaggat
gatggggaagcggaaatcactggacgagtggttggaacagttaggcgacacatacctatt
gatacccgtgatcctcgtgttgcgattctccattattatgttggggactcttatgatcct
atcagggttgatgatgatcatatcataagaaaacttcaaattggaagcatttggtacctc
acaatacttggctctcttgctaccacacagagggagtatgttgccctacatgcatttcgt
cgcttaaattcacagatgcaaactgctatccttcagcctagtcctgaacacttccctaaa
tatgagcagcagaccccagccatgcctgaatgctttacaccaaactttgttgatcatctt
cgtaggacctttaatgaaccccagttggcagcaatccaatgggctgccacgcatacagct
gctggtacaagtagtggaacaacaaaaaggcaagaaccgtggccctttacccttgttcag
ggacctccaggaacagggaagacgcatactgtatggggaatgttgaatgtcattcacctt
gtgcagtatcagcattactacacctccttgcttaagcatgtagccccggaaagctacaag
caagctaatgagatcagttcagataatgcacccatgggatctattgatgaagttcttcaa
aacatgaaccagaatctcttgcgaactttgcccaagttggtccccaaacctagaatgttg
gtttgtgctccatctaatgctgccactgatgagcttcttgctcgtgtccttgatcgtgga
tttattgatggtgagatgaaagtatatcgacccgatgtggctcgagttggggttgattct
cagacacgtgctgcccaagcagtttctgttgagcgtagaactgaacagcttttgctcaag
agtgaggatgaagttcttggatggatgcatcagttaaagaatcgcgaggctcagttgact
cagcagttacattgtcttcatagagaacttaatgctactgccgctgcagttcgttcccaa
ggatctgttggtgtagaccctgatgttctcatggccagggatcagagtcgggatgctcta
ctgcaaaatcttgcagctgtagttgaaggaagggacaaggttttagttgagatgtctcgc
cttgcgcttttggaaagtaggtaccgacatggtagtgctttcaatttggatgaggcccgt
gccagtttggaggccagttttgccaatgaagcagagatagttttcactacagtttccagc
agtggtcgcaagttgttctctcgtctttcccatggctttgatatggtggtcattgacgag
gcagctcaagccagtgaggtgggagttctgcctcccctctctcttggtgcagctcgatgt
gttctggtcggagatcctcagcagcttcctgctacagttattagcaaggctgctggaaca
ttgatgtacagtaggagtctttttgagagattccaacaagccggttgcccgacaatgttg
ttgtctgtgcagtatagaatgcatccccaaattcgagatttcccttctagatacttctat
caggggcgccttactgatagtgaaagcgtggttaaattgcctgatgaggtataccacaag
gaccctttacttagaccttatatattctatgatatcaaacatggacgggagtctcacagg
ggtggatcagtctcttatcaaaacatacatgaagcacaattttgtctccgattgtatgag
catcttcagaaaactttgaaatctttgggtatgggaaagattagtgttggcataattact
ccttacaagctgcagctgaaatgcctccagcgtgaatttgaggaagtcttaaattcagaa
gaagggaaggacctatatattaatactgtagatgctttccaaggtcaagaacgagatgtc
attataatgtcgtgtgtgcgtgcttctagtcatggtgttggctttgttgcagatattaga
cggatgaatgttgcacttacacgtgcaaggagggccctttgggtcatgggaaatgcaaat
gctctggtacaatctgatgattgggctgcgttgattgctgatgcaaaatcccgaaattgc
tatatggagatggactcccttccgaaggactttatggtatcgaagggacctacttacacg
ccactgcctggtaaggcttcctcaaatatgaggggcatgagatcaggtggacaaaggttt
agaggaatggaggcgtatggggatcccaggatgggcgcaccatgtgaagatgatgaaaag
atgggtgcaccagcaagcttcagaaatgggaatcatcgatcatcaagatatccaatggag
aattctttagacgattttgaccatatgggcgataaatccagagattcctggcagtatggt
gcacagaagaagcagaactctgctggaaatgggggaaagagagatgtgtaa
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