KEGG   Arachis ipaensis: 107628783
Entry
107628783         CDS       T04301                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI3
  KO
K10752  histone-binding protein RBBP4
Organism
aip  Arachis ipaensis
Pathway
aip03082  ATP-dependent chromatin remodeling
aip03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107628783
   03083 Polycomb repressive complex
    107628783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aip03036]
    107628783
Chromosome and associated proteins [BR:aip03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     107628783
  Histone modification proteins
   HAT complexes
    HATB complex
     107628783
   HDAC complexes
    Sin3A-HDAC complex
     107628783
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     107628783
    PRC2.2
     107628783
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     107628783
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107628783
  Chromatin remodeling factors
   NuRD complex
    107628783
   NuRF complex
    107628783
   NuRF complex (fruit fly)
    107628783
SSDB
Motif
Pfam: WD40 Beta-prop_EIPR1 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR19_1st WD_LRWD1 MIOS_WD40 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd eIF2A WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_NUP159_NUP214 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 107628783
NCBI-ProteinID: XP_016186870
LinkDB
Position
B03:8401966..8404500
AA seq 408 aa
MAEEEYDDDVEEEFSVWKRNTPLLYDLVISHPLPWPSLTVHWLHSSPQPHSHPSFNLHKI
LYATHTSNSEPNYLILANVALPANPSQPVAAAVDAENPVLPKVEVTQRIMVDGEVNRARS
MPQNPSVVASKTCGSEVYVFDVEKQHGKEQGSGCDPDLRLRGHDKEGYGLSWSPFKKGYL
LSGSHDSKICVWDVLAADQDNVLDAIHVFEAHDGVVGDVSWHSKHESLFGSVGDDCKLII
WDLRTNKAQQSVKAHENEVNFISFNPYNEWIVATASSDTTIALFDTRKLAEPLHVLSSHT
DEVYQVEWDPNHETVLASSGADRRLNVWDLSRVGDEQNEGDGDGGPPELLFSHGGHKGKI
SDFSWNKNQPWVISSVAEDNSFHVWQMAENIYNEDGDDEDIWTADGQN
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggcggaagaagagtacgatgatgatgtcgaagaagagttctccgtttggaagaggaac
acgccgttgttgtacgatcttgtcatttcgcaccctctcccatggccttctctcactgtt
cactggctccattcttctccacaaccccattctcatccttccttcaatctccacaagatc
ctttacgcaactcacacttcaaattccgaaccgaactacctcatcctcgccaatgttgct
cttcctgccaacccatcacagcctgtcgctgctgctgttgacgctgaaaacccggttctg
cccaaggtggaggttacccaaaggattatggttgatggggaggtgaatagggcgaggagt
atgccccagaaccctagtgttgttgcttccaagacttgtggttctgaggtttatgtgttt
gatgttgagaagcagcatggaaaggaacaaggtagtggttgtgatcctgatttgaggttg
aggggtcatgacaaagaagggtatggtttgtcttggagcccttttaagaaaggctatctt
ttgagtggctcccatgactcaaagatttgcgtgtgggatgtgttagctgcggatcaagat
aatgtgcttgatgcgatccatgtttttgaggcacatgatggcgtggttggggatgtatcc
tggcattcaaagcacgagagtttatttggctctgttggcgatgattgcaaattaatcatt
tgggacttgaggacaaataaggcccagcaatcagtcaaggcacatgagaatgaggtgaac
tttatttctttcaatccatataatgaatggattgtagctacagcatcttcagacaccacc
attgccctctttgatacaaggaaactggcggagccactgcatgttttgagtagccacacc
gatgaggtgtaccaggtggagtgggatcctaatcatgagaccgtgttggcatcttcaggt
gctgacagaaggctgaacgtttgggaccttagcagagtcggggatgagcagaatgaaggg
gatggtgatggtggccctcctgagctactcttctctcatggtggtcacaaagggaagata
tcggacttttcgtggaacaagaatcaaccatgggttatctcaagtgtggctgaggacaat
tctttccatgtgtggcaaatggctgagaatatatacaatgaagatggtgatgacgaagat
atctggacagctgatggtcaaaactaa

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